FC920855

Overview
NameFC920855
Unique NameFC920855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50
Identity = 108/237 (45.57%), Postives = 151/237 (63.71%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL---IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAI 693
            G++LK+  +++GL LE+ + P+G L+++FESRPD L Q+ASLA+ SGN LLLKGGKEA  SN  LH ++  A+  T G ++   + LV SRE++              PRGS+ LV  ++E +K IPVLGHA+G+ HVY+DK  +   A  IV D+K DYP+ACNA ET+L+HKDLA     + L    + EGV L  GP+ + LLK   P       EY S+ CT+E+VD+V  A+
Sbjct:  444 GRVLKKVKISEGLFLEQVTVPIGSLMVIFESRPDCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQEAL-GTHGFEMRDAVTLVRSREDVADLLQLKDLIDLIIPRGSSDLVRSMQEKSKGIPVLGHAEGVWHVYIDKDCDEQKAIQIVRDSKCDYPSACNAAETILIHKDLATAPFFDSLCSMFKAEGVKLHAGPKLAALLKFAPPPAESMSFEYGSLECTLEVVDNVEEAV 679          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: P5CS_MOUSE (Delta-1-pyrroline-5-carboxylate synthetase OS=Mus musculus GN=Aldh18a1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.748e-50
Identity = 108/246 (43.90%), Postives = 155/246 (63.01%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAID-IFITWKCHTD 726
            G++L+RT +A  L LE+ + P+GVLL++FESRPD L Q+A+LAI SGNGLLLKGGKEA  SN ILH +   A+     ++ I LV +REE+              PRGS++LV  I+++ K IPV+GH++ ICH+YVD  A++D    +V D+K +YPAACNA+ETLL+H+DL      ++++  L+ E V +  GP+ +  L     E +    EY  +   +E+VD V+ AID I      HTD
Sbjct:  452 GRVLRRTRIAKNLELEQVTVPIGVLLVIFESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAIQLVNTREEVEDLCRLDKIIDLIIPRGSSQLVRDIQKAAKGIPVMGHSESICHMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLEVCIEVVDSVQEAIDHIHKYGSSHTD 697          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_MICAN (Gamma-glutamyl phosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=proA PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.673e-49
Identity = 104/228 (45.61%), Postives = 148/228 (64.91%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPET--RLFHHEYNSMVCTVEIVDDVRAAID 696
            +L  GLIL + +CPLGVL ++FE+RPDAL+QI SLAI+SGNG++LKGGKEA+RS   L  +I  A+  T V    + L+T+REEI              PRGSN+ V  I+ +T+IPVLGHADGICH+Y+DK A+L  A  I +D K  YPAACN +ETLLVH+D+A    L  +   L+ + V L G     +++ +P      +  EY+ ++ +++IVD + +AI+
Sbjct:  104 ELDQGLILRRITCPLGVLGVIFEARPDALIQITSLAIKSGNGVILKGGKEAIRSCQALVTIIHQALSQTKVNPAAVRLLTTREEIQELLKLDQYIDLIIPRGSNEFVRYIQNNTRIPVLGHADGICHLYIDKEADLSKAIRITVDGKTQYPAACNTIETLLVHQDIA-RQFLPAVAQALEEKKVKLLGDEATRQMINVPSATEEDWQTEYSDLILSIKIVDSLESAIE 330          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNP2 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=proA PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.726e-49
Identity = 110/246 (44.72%), Postives = 159/246 (64.63%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PET-RLFHHEYNSMVCTVEIVDDVRAAIDIFITW-KCHTD 726
            G +    +L   L+L++ +CPLGVL I+FE+RP+AL+QI SLAI+SGNG++LKGGKEA++S  +L ++I +A+ DT V  + + L+T+REEI              PRGSN  V  ++++T IPVLGHADG+CH+YVD +A+L     IV+DAK  YPAACNA+ETLL+H+ +A    L ++   L  + V L G     K++ + P T   +  EY+ +V  ++IV DV AAI    T+   HTD
Sbjct:   94 GHLQLHRELDQDLVLKRVTCPLGVLGIIFEARPEALIQITSLAIKSGNGVILKGGKEAIQSCTVLTEIIQTALQDTAVSPQAVTLLTTREEIKTLLSLDQYVDLIIPRGSNAFVQYVQQNTTIPVLGHADGVCHLYVDVAADLSKTIPIVVDAKTQYPAACNAVETLLIHEKIAPE-FLPQIAAALTAKQVTLRGDAATQKIMPVQPATAEDWRTEYSDLVLAIKIVPDVEAAIAHINTYGSKHTD 338          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PROMP (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=proA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.416e-48
Identity = 105/234 (44.87%), Postives = 153/234 (65.38%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAI 693
            GQI  + +L+ GLILE+ + P+GVL ++FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  +   +   + D+ + E  I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+Y+D   NLD+A  + +D+KI YPAACNA+ETLL+HKD A +  LN+ +       V L G  ++ +L    E     +  EY  ++ +++IV+D+  AI
Sbjct:  103 GQIQIKRELSKGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRSGNGVMLKGGSEANLTNLAIVSALKEGLQDSNLDENAICLLTSRKDSMAMLNLEKYINLIIPRGSNELVKFIQENTEIPVLGHADGICHLYIDNEVNLDMALKVALDSKIQYPAACNAVETLLIHKDTA-SEFLNKAIPMFNSNDVKLIGDKKSFQLGVAFEANYEDWQTEYLDLILSIKIVNDLEEAI 335          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_THEEB (Gamma-glutamyl phosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=proA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.177e-48
Identity = 108/240 (45.00%), Postives = 148/240 (61.67%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRS-NAILHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDIFITW 711
            GQ     +L  GLIL + +CPLGVL ++FE+RPDA+VQIASLAI+SGNG +LKGG+EA RS   I+  +        V    I L+T R EI              PRGSN+ V  I+ +T+IPVLGHADG+CH+YVD++A+L+ A  I +DAK  YPAACNA+ETLLVH+D+A    L ++   LQ  GV L G   A  L  + +     +  EY  ++  +++V D+ AA+D   T+
Sbjct:  103 GQRQLHRELDTGLILSRVTCPLGVLGVIFEARPDAVVQIASLAIKSGNGAILKGGQEASRSCQTIMQTIHRGLEKSAVPAGAIALLTQRSEISELLQLDQWVDLIIPRGSNEFVRYIQNNTRIPVLGHADGLCHLYVDRAADLEKAIAITLDAKTQYPAACNAIETLLVHRDIA-EAFLPKVAAALQQAGVELRGDAIACDLVPMSLASEADWATEYCDLILAIKVVPDLDAALDHIATY 341          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PROM9 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=proA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.177e-48
Identity = 104/234 (44.44%), Postives = 155/234 (66.24%), Query Frame = 1
Query:    4 QILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAID 696
            Q+  + +LA GLILE+ + P+GVL ++FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  + K +   + ++ + +  I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+++D  ANL++A ++ +D+KI YPAACNA+ETLLVHKD+A    L + +       V L G  R  +L    E  +  +  EY  ++ +++IVDD+  AI+
Sbjct:  104 QVQIKRELAKGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRSGNGVMLKGGSEANLTNTAIVKALKKGLYESGLDKNAICLLTSRKDSMSMLNLEKYINLIIPRGSNELVKFIQENTRIPVLGHADGICHLFIDNEANLEMALSVALDSKIQYPAACNAIETLLVHKDIA-QVFLEKAIPLFNSNDVKLIGDKRTVELGVKYEASVEDWQTEYLDLILSIKIVDDLEEAIN 336          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PROM0 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=proA PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.769e-47
Identity = 103/233 (44.21%), Postives = 155/233 (66.52%), Query Frame = 1
Query:    4 QILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAI 693
            QI  + +L++GLILE+ + P+GVL ++FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  + K +   + ++ + +  I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+++D  ANL++A ++ +D+KI YPAACNA+ETLLVHKD+A    L + +       V L G  ++ +L    E     +  EY  ++ +++IVDD+  AI
Sbjct:  104 QIQIKRELSNGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRSGNGVILKGGSEANLTNTSIVKALQEGLDESGLDKNAICLLTSRKDSMAMLNLEKYINLIIPRGSNELVKFIQENTRIPVLGHADGICHLFIDIEANLEMALSVALDSKIQYPAACNAIETLLVHKDIA-PAFLEKAIPLFNSNDVKLIGDRKSVELGLEHEASAEDWQTEYLDLILSIKIVDDLDEAI 335          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PROM5 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=proA PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.015e-46
Identity = 102/234 (43.59%), Postives = 148/234 (63.25%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAI 693
            GQI  + +L+ GLILE+ + P+GVL ++FESRPDA++QI+SLAIR+GNG++LKGG EA  +N  +   +   +  + + +  I L+TSR++               PRGSN+LV  I+E+T IPVLGHADGICH+Y+D   NLD+A  + +D+KI YPAACNA+ETLL+HK +A    L + +       V L G  +A KL    E     +  EY  ++ +++IVDD+   I
Sbjct:  103 GQIQIKKELSKGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRAGNGVMLKGGSEANFTNQAIVSALKKGLQKSNIDDNAICLLTSRKDSMAMLNLEKFINLIIPRGSNELVKFIQENTGIPVLGHADGICHLYIDDEVNLDIALKVALDSKIQYPAACNAIETLLIHKSIA-PAFLKKAIPIFNSNNVKLIGDKKAVKLGVAFEANYEDWQTEYLDLILSIKIVDDLEEGI 335          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_ANASP (Gamma-glutamyl phosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=proA PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.015e-46
Identity = 104/237 (43.88%), Postives = 152/237 (64.14%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAI 693
            GQ+  + +L  GL+L++ +CPLGVL I+FE+RP+A +QI SLAI+SGNG++LK GKEA+RS   + K +   +  T V  +++ L+T+REE               PRGSN  V  ++E+T+IPVLGHADGICHVY+DKSA+++ A  + +DAK+ YPAACNA+ETLLVH+ +A    L ++   L    V L G  R  ++L  PE        +  EY+  + +++IVD +  AI
Sbjct:   99 GQVQIQRELDTGLVLKRITCPLGVLGIIFEARPEAAIQIISLAIKSGNGVILKCGKEAVRSCEAIVKAVKQGLSTTDVNPEVVQLLTTREETLELLRLDKYVDLIIPRGSNSFVRFVQENTRIPVLGHADGICHVYIDKSADIEKAIAVSVDAKVQYPAACNAIETLLVHQSIAAE-FLPKVAQALAEREVELKGDERTLQIL--PEIAAATAIDWETEYSDFILSIKIVDSLTEAI 332          
The following BLAST results are available for this feature:
BLAST of FC920855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALH13_CAEEL3.370e-5045.57Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
P5CS_MOUSE5.748e-5043.90Delta-1-pyrroline-5-carboxylate synthetase OS=Mus ... [more]
PROA_MICAN1.673e-4945.61Gamma-glutamyl phosphate reductase OS=Microcystis ... [more]
PROA_SYNP23.726e-4944.72Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROMP1.416e-4844.87Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_THEEB9.177e-4845.00Gamma-glutamyl phosphate reductase OS=Thermosynech... [more]
PROA_PROM99.177e-4844.44Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM07.769e-4744.21Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM51.015e-4643.59Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_ANASP1.015e-4643.88Gamma-glutamyl phosphate reductase OS=Anabaena sp.... [more]

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Properties
Property NameValue
Genbank descriptionC32013H03EF RVDevelop1 Citrus clementina cDNA clone C32013H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920855 ID=FC920855; Name=FC920855; organism=Citrus clementina; type=EST; length=728bp
GGTCAAATTTTAAAGAGAACAGACCTTGCGGATGGACTCATCCTGGAGAA
AACATCATGTCCTTTGGGCGTCCTCTTGATAGTATTTGAATCTCGACCTG
ATGCCCTGGTCCAGATAGCTTCATTGGCCATTCGGAGTGGAAATGGTCTA
CTACTGAAAGGAGGAAAAGAAGCTATGCGGTCAAATGCAATCTTGCACAA
GGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAACTTATTGGAC
TTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGATGTG
ATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTTGTTTCTCAAATCAA
GGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCATG
TTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTATT
GATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTCT
GGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTAG
AACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAAA
TTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAAT
GGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACATAT
TCATCACATGGAAGTGCCATACTGATGC
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