FC920863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920863 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 80/230 (34.78%), Postives = 116/230 (50.43%), Query Frame = 1 Query: 1 FALSLPGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFF-XXXXXXXXXXXXXXXTPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDAXNSWGISVSFISIILLPL 687 F SL G+TPLAER+ + TEQ+A YTGPT+GGLLNAT GNATE+II+++AL I VV+ F GG+ + ++Q +++ A VNS + + K+ + LSR SS +ML+ Y +YL FQL + R + I WL +T I++LS ++V I+ A S + V+FIS+ILLP+ Sbjct: 98 FLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQY-GKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLYSPIGEQEEEVTEDEEEEKEITQGEAICWLFVLTIWISILSGYLVDAIQGASESLNMPVAFISVILLPI 326
BLAST of FC920863 vs. ExPASy Swiss-Prot
Match: CAX4_ORYSJ (Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21 Identity = 75/239 (31.38%), Postives = 107/239 (44.77%), Query Frame = 1 Query: 1 FALSLPGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREF----------FXXXXXXXXXXXXXXXTPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDAXNSWGISVSFISIILLPL 687 F LS+ G+ PLAER+ F T+ + VG LLN+ GNATELII+I AL K+ VV+ F GG+A + Q + + A VNS Y + + K+ L LSR SS +ML+ Y +YL FQL +R P I +W+ A I++LS ++V I+ A +W I V+FIS++LLP+ Sbjct: 97 FPLSMLGIIPLAERLGFATD---WQISCEVGRLLNSAFGNATELIISIHALSRGKLHVVQQCLLGSILSNLLLVLGSAFFSGGLACGKTMQTFSKADAVVNSGLLLMAVMGLLIPAALHYTHSEAQF-GKSELALSRFSSCIMLVAYASYLYFQLSNNRRRNEANVYPCMPLIKRRIQDDVDGNDDEVPEISKREAISWIAIFIAWISMLSYYLVDAIDGASKAWNIPVAFISVVLLPV 331
BLAST of FC920863 vs. ExPASy Swiss-Prot
Match: VCX1_YEAST (Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae GN=VCX1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18 Identity = 69/236 (29.24%), Postives = 109/236 (46.19%), Query Frame = 1 Query: 1 FALSLPGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFK----YAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFXXXXXXXXXXXXXXXT---PVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDAXNSWGISVSFISIILLPL 687 F + + PLA ++ TE++A G T+GGLLNAT GNA ELI++I AL + ++ +V+ GG R +Q +++ A S F+ + I K L+LSR +SIV+LI Y+ +L FQL +H F + S L+G T II+ ++F+VGTI++ S G+S +FI +I++P+ Sbjct: 64 FLFNFLAIIPLAAILANATEELADKAGNTIGGLLNATFGNAVELIVSIIALKKGQVRIVQASMLGSLLSNLLLVLGLCFIFGGYN--RVQQTFNQTAAQTMSSLLAIACASLLIPAAFRATLPHGKEDHFIDGK-ILELSRGTSIVILIVYVLFLYFQLGSHHALFEQQEEETDEVMSTISRNPHHSLSVKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPI 296
BLAST of FC920863 vs. ExPASy Swiss-Prot
Match: YFKE_BACSU (Putative cation exchanger yfkE OS=Bacillus subtilis GN=yfkE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 65/233 (27.90%), Postives = 96/233 (41.20%), Query Frame = 1 Query: 1 FALSLPGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKAT-LQLSRASSIVMLIGYIAYLVFQLWTHREFFXXXXXXXXXXXXXXXTPVIGFWSG---FAWLVGMTAIIALLSEFVVGTIEDAXNSWGISVSFISIILLPL 687 FA+ + LA + TE ++ GP +GGLLNAT GNA ELII++FAL E +V F GG+ KY R++ +++ F S A+ L LS SI+M++ Y+A L F+L THR + WSG L T ++A +SE +V T +G S FI +I++ + Sbjct: 30 FAVYCVTIIALASYMGRATESLSIIAGPRIGGLLNATFGNAVELIISLFALKEGLTGIVLASLTGSVLGNLLLVAGLSFFVGGL-------KYKRQEFNIHDARHNSGLLIFAIIVAFVIPEVFSVGMGNASKLNLSIGISIIMILLYVAALYFKLVTHRGVYQPNNAAQTEEEEEPE------WSGKVATIVLFAATIVVAYISENLVHTFHSVAEQFGWSELFIGVIIVAI 249 The following BLAST results are available for this feature:
BLAST of FC920863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920863 ID=FC920863; Name=FC920863; organism=Citrus clementina; type=EST; length=704bpback to top |