FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ACIBY (Probable potassium transport system protein kup OS=Acinetobacter baumannii (strain AYE) GN=kup PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSIN-WILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   LG  PR+ I HTS    GQIY+P +NW L++  + + + F+ + ++ +A GLAV   ML  T L+++ I   W  S             +E++   A+ +K L G WVP+ +  I +  +  W  G   T  K E D    +S++ ++ S+G +  +  V G  +  T   + +P    H + +    HQ  + + +    VP V P+ER
Sbjct:  304 SQAVISGVFSLARQAIQLGYLPRLSIKHTSESEEGQIYVPFLNWLLLIAIIILILIFKTSSNLASAYGLAVTLTMLCDTILVAVFIYSAWKWSLPKVLLLIIPFFILESVLVGATSLKILSGGWVPLLIGAIAVTILMTWKRGRELTFAKLEHDT---LSLDLFVKSIGNS--VHWVPGDAVFMTGTPNVVPHAMLHNIKHNKVLHQRNILVTVVIEDVPFVAPEER 525          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ACIBT (Probable potassium transport system protein kup OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=kup PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSIN-WILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   LG  PR+ I HTS    GQIY+P +NW L++  + + + F+ + ++ +A GLAV   ML  T L+++ I   W  S             +E++   A+ +K L G WVP+ +  I +  +  W  G   T  K E D    +S++ ++ S+G +  +  V G  +  T   + +P    H + +    HQ  + + +    VP V P+ER
Sbjct:  304 SQAVISGVFSLARQAIQLGYLPRLSIKHTSESEEGQIYVPFLNWLLLIAIIILILIFKTSSNLASAYGLAVTLTMLCDTILVAVFIYSAWKWSLPKVLLLIIPFFILESVLVGATSLKILSGGWVPLLIGAIAVTILMTWKRGRELTFAKLEHDT---LSLDLFVKSIGNS--VHWVPGDAVFMTGTPNVVPHAMLHNIKHNKVLHQRNILVTVVIEDVPFVAPEER 525          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ACIBS (Probable potassium transport system protein kup OS=Acinetobacter baumannii (strain SDF) GN=kup PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSIN-WILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   LG  PR+ I HTS    GQIY+P +NW L++  + + + F+ + ++ +A GLAV   ML  T L+++ I   W  S             +E++   A+ +K L G WVP+ +  I +  +  W  G   T  K E D    +S++ ++ S+G +  +  V G  +  T   + +P    H + +    HQ  + + +    VP V P+ER
Sbjct:  304 SQAVISGVFSLARQAIQLGYLPRLSIKHTSESEEGQIYVPFLNWLLLIAIIILILIFKTSSNLASAYGLAVTLTMLCDTILVAVFIYSAWKWSLPKVLILIIPFFILESVLVGATSLKILSGGWVPLLIGAIAVTILMTWKRGRELTFAKLEHDT---LSLDLFVKSIGNS--VHWVPGDAVFMTGTPNVVPHAMLHNIKHNKVLHQRNILVTVVIEDVPFVAPEER 525          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ACIBC (Probable potassium transport system protein kup OS=Acinetobacter baumannii (strain ACICU) GN=kup PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSIN-WILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   LG  PR+ I HTS    GQIY+P +NW L++  + + + F+ + ++ +A GLAV   ML  T L+++ I   W  S             +E++   A+ +K L G WVP+ +  I +  +  W  G   T  K E D    +S++ ++ S+G +  +  V G  +  T   + +P    H + +    HQ  + + +    VP V P+ER
Sbjct:  304 SQAVISGVFSLARQAIQLGYLPRLSIKHTSESEEGQIYVPFLNWLLLIAIIILILIFKTSSNLASAYGLAVTLTMLCDTILVAVFIYSAWKWSLPKVLLLIIPFFILESVLVGATSLKILSGGWVPLLIGAIAVTILMTWKRGRELTFAKLEHDT---LSLDLFVKSIGNS--VHWVPGDAVFMTGTPNVVPHAMLHNIKHNKVLHQRNILVTVVIEDVPFVAPEER 525          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ACIB3 (Probable potassium transport system protein kup OS=Acinetobacter baumannii (strain AB307-0294) GN=kup PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSIN-WILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   LG  PR+ I HTS    GQIY+P +NW L++  + + + F+ + ++ +A GLAV   ML  T L+++ I   W  S             +E++   A+ +K L G WVP+ +  I +  +  W  G   T  K E D    +S++ ++ S+G +  +  V G  +  T   + +P    H + +    HQ  + + +    VP V P+ER
Sbjct:  304 SQAVISGVFSLARQAIQLGYLPRLSIKHTSESEEGQIYVPFLNWLLLIAIIILILIFKTSSNLASAYGLAVTLTMLCDTILVAVFIYSAWKWSLPKVLLLIIPFFILESVLVGATSLKILSGGWVPLLIGAIAVTILMTWKRGRELTFAKLEHDT---LSLDLFVKSIGNS--VHWVPGDAVFMTGTPNVVPHAMLHNIKHNKVLHQRNILVTVVIEDVPFVAPEER 525          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_LEGPL (Probable potassium transport system protein kup 1 OS=Legionella pneumophila (strain Lens) GN=kup1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 65/225 (28.89%), Postives = 110/225 (48.89%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIH-TELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERF 675
            SQA+ITATFS+ KQ   LG  P++ I+ TS    GQIY+P+IN+ L +  +A  + F+ + ++ +A G+AV   ML+   +++   +  W  S             ++  +  A+  KF+ G WVPI L+F     MY W YG     +    NK  I+ IL       + ++ G+  I  T++       F HF+    +  + V+ +      +P+V   +R+
Sbjct:  295 SQAVITATFSLTKQAVLLGLCPKIPIVQTSMLHSGQIYVPQINFILFIGTMAFCLAFKTSDNLAHAYGIAVNLEMLLVDAMVAYAAISIWRWSIFNVMFLFGLFLLIDLAFLGANTHKFITGGWVPIVLAFFIAFIMYSWRYGLEYLRDNFYMNKEDISKILKQLQYKSLNQLPGVSAIFITDVYDKSGGSFLHFLKLSRSVPENVLIVNYIVDNIPYVHYSQRY 519          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_GEOSL (Probable potassium transport system protein kup 1 OS=Geobacter sulfurreducens GN=kup1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 63/223 (28.25%), Postives = 101/223 (45.29%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   L   PR++I+ TSS+  GQIYIP +NW LML  + +  GF  +  +  A G+AV T M++T  L+  V++  WH              +V+  +F A+++K   G W+P+A        M  W  G        +     +   L         RV G  +  +  +   P    H + +    H+ VV L + +  +P V   ER
Sbjct:  309 SQAVISGVFSLTRQAIQLRLSPRMRIVQTSSEEIGQIYIPAVNWALMLATITLVAGFGSSSGLAAAYGVAVATTMVITALLVRFVMLERWHWHPLAVAGLTVVFLTVDLAFFGANILKVGAGGWIPLAAGLAVFTVMITWRRGRELVTTHLLAQATPLPSFLEELAAKPPQRVPGTAVFMSGRLFPAPPTLIHHLEHNKVLHEQVVILTVLTEDIPRVSASER 531          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_THIDA (Probable potassium transport system protein kup OS=Thiobacillus denitrificans (strain ATCC 25259) GN=kup PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22
Identity = 63/230 (27.39%), Postives = 111/230 (48.26%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT----LKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   +G  PR+ I HTS+   GQIYIP +NWTL      + +GF+ + ++  A G+AV     + T L++L++ + W+              +++  +F A+ +K  EG W P+ ++ +    +  W  G      + +E  +     +  +L+  P     RV G  +  T   SG+P    H + +    H+ VV L ++   VP+V  + R  V
Sbjct:  303 SQAVISGAFSVTRQVVQMGYAPRLVIRHTSATAAGQIYIPFVNWTLAAGVALLVLGFQSSSNLAAAYGIAVTATFAIDTVLLALLMRVNWNLGRAPTLVAAALFLTLDLAFFGANAVKIPEGGWFPLVVAVVVFTILVTWRRGREIVGARLHERGLPLAPFVESLLAHPP----ARVGGTAVFMTTDPSGVPLALLHNLKHNKVLHERVVILNVRYGEVPYVPAEHRLAV 528          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_NITHX (Probable potassium transport system protein kup OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=kup PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22
Identity = 63/223 (28.25%), Postives = 110/223 (49.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+I+Q   LG  PR ++ +TS    GQIY+P +N  L++  L + + FR +  + +A G+AV T M+    +  +V+   W+               V+ ++FSA+L+K L+GAWVP+    I +V ++ W  G     +   + +V +  ++          V+G  +  T   + +P    H + +    H+  V L I++   P V P ER
Sbjct:  345 SQAVITGAYSLIRQAVQLGLLPRFEVRYTSETHAGQIYLPRVNILLLIGVLLLVLLFRTSSGLASAYGIAVSTTMVADGIMGFVVVWKLWNWRAATAAALVVPLVVVDIMFFSANLLKLLDGAWVPLLFGLIMVVLIWTWRRGAAILIKKTRRTEVPLLDLIKSLEKRPPHIVKGTAVFLTSDPNFVPTALLHNLKHNKVLHEHNVILTIETAQTPRVDPSER 567          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_LEGPC (Probable potassium transport system protein kup 1 OS=Legionella pneumophila (strain Corby) GN=kup1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22
Identity = 65/225 (28.89%), Postives = 111/225 (49.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIH-TELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERF 675
            SQA+I+ATFS+ KQ   LG  P++ I+ TS    GQIY+P+IN+ L +  +A  + F+ + ++ +A G+AV   ML+   +++   V  W  S             ++  +  A+  KF+ G WVPI L+F+    MY W YG     +    NK  I+ IL       + ++ G+  I  T++       F HF+    +  + V+ +      +P+V   +R+
Sbjct:  302 SQAVISATFSLTKQAVLLGLCPKIPIVQTSMLHSGQIYVPQINFILFIGTMAFCLAFKTSDNLAHAYGIAVNLEMLLVDAMVAYAAVSIWRWSTFNVIFLFGLFLLIDLAFLGANTHKFITGGWVPIVLAFVIAFIMYSWRYGLEYLRDNFYMNKEDISKILKQLQYKSLNQLPGVSAIFITDVYDKSGGSFLHFLKLNRSVPENVLIVNYIVDNIPYVHYSQRY 526          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP_ACIBY9.138e-2329.52Probable potassium transport system protein kup OS... [more]
KUP_ACIBT9.138e-2329.52Probable potassium transport system protein kup OS... [more]
KUP_ACIBS9.138e-2329.52Probable potassium transport system protein kup OS... [more]
KUP_ACIBC9.138e-2329.52Probable potassium transport system protein kup OS... [more]
KUP_ACIB39.138e-2329.52Probable potassium transport system protein kup OS... [more]
KUP1_LEGPL9.138e-2328.89Probable potassium transport system protein kup 1 ... [more]
KUP1_GEOSL9.138e-2328.25Probable potassium transport system protein kup 1 ... [more]
KUP_THIDA1.193e-2227.39Probable potassium transport system protein kup OS... [more]
KUP_NITHX1.193e-2228.25Probable potassium transport system protein kup OS... [more]
KUP1_LEGPC1.193e-2228.89Probable potassium transport system protein kup 1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
back to top