FC920918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 5.671e-53 Identity = 93/158 (58.86%), Postives = 118/158 (74.68%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 ++GQAG Q+ NSCWELYCLEHGIQPDG + + F+TFFSETG G++VPR ++ DLEP+V+DEVRTG+YR LFHPE LI+GKEDA+NN+ARGHYTVG+E++D LD+VR++AD+C+GLQGFLVF + VDYGKKS Sbjct: 8 NVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKKEDPDHGFSTFFSETGQGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPENLITGKEDASNNYARGHYTVGKEMIDQVLDKVRRMADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKS 165 HSP 2 Score: 23.483 bits (49), Expect = 5.671e-53 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F +YP+PQ +T Sbjct: 163 KKSKLEFCVYPAPQNAT 179
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 8.033e-52 Identity = 97/162 (59.88%), Postives = 118/162 (72.84%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMP----SDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 HIGQAG Q+GNS WELY LEHG+ DG + D + G +F TFF+ETGSG++VPR++FVDL+PS IDE+RTG YRQLFHPEQLISGKEDAANN+ARGHYTVG+E+VD +DRVR+L+DNC+ LQGFLVF + +YGKKS Sbjct: 9 HIGQAGTQLGNSAWELYLLEHGLGADGRLDPEKGEDINAGG---SFETFFTETGSGKYVPRSIFVDLDPSPIDEIRTGPYRQLFHPEQLISGKEDAANNYARGHYTVGKELVDTVVDRVRRLSDNCSSLQGFLVFHSFGGGTGSGFGALLLERLSTEYGKKS 167 HSP 2 Score: 27.335 bits (59), Expect = 8.033e-52 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F +YPSP+VST Sbjct: 165 KKSKLEFAVYPSPRVST 181
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.779e-51 Identity = 96/160 (60.00%), Postives = 119/160 (74.38%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPS--DTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 ++GQAG Q+GN+CWELY EHGI+PDG + D G + F+TFFSETGSG++VPRA++VDLEP+VIDEVRTG Y+ LFHPEQLI+GKEDAANN+ARGHYTVGREI+D LDRVR+++D C GLQGFL ++ +DYGKKS Sbjct: 8 NVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGG-EEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDILDRVRRMSDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSLDYGKKS 166 HSP 2 Score: 27.7202 bits (60), Expect = 1.779e-51 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F +YP+PQVST Sbjct: 164 KKSKLEFAVYPAPQVST 180
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.180e-51 Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 H+GQAG+Q+GN+CWELY +EHG+ PDG + SD S D F+TFFSET SG++VPR+++VDLEP+VIDEVR G YR LFHPE +I+GKEDAA+N+ARGHYT+G+E +D+ +D+VR+L DNC GLQGF VF + DYGKKS Sbjct: 8 HVGQAGVQIGNACWELYTIEHGLSPDGRL-SDDSPSKHDDGFSTFFSETSSGKYVPRSLYVDLEPNVIDEVRNGPYRSLFHPETMITGKEDAASNYARGHYTIGKEQIDVVMDKVRRLVDNCNGLQGFFVFHSFGGGTGSGFGALILERLSTDYGKKS 164
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 6.696e-51 Identity = 88/158 (55.70%), Postives = 116/158 (73.42%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 H+GQAG+Q+GN+CWELY LEHG+ PDG + D+ + HD+ +TFFSETG G+HVPR ++VDLEP VID+V+ G YR LFHPE +I+GKEDAANN+ARGHYTVG+E++D +D++R+LADNC+G QG VF + DYGKK+ Sbjct: 8 HVGQAGVQIGNACWELYTLEHGLSPDGRLMDDSP--SKHDSGSTFFSETGQGKHVPRRLYVDLEPGVIDDVKNGPYRSLFHPETMITGKEDAANNYARGHYTVGKELIDPVMDKLRRLADNCSGRQGLFVFHSFGGGTGSGFGALLLERLSTDYGKKA 163 HSP 2 Score: 25.409 bits (54), Expect = 6.696e-51 Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F +YP+PQ+S+ Sbjct: 161 KKAKLEFCVYPAPQLSS 177
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 4.281e-50 Identity = 94/159 (59.12%), Postives = 113/159 (71.07%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVG-ACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 ++GQAG Q+GN+CWELY LEHGI+PDG + S + F+TFF ETG G+ VPRA++VDLEP+VIDEVR G Y+ LFHPEQLISGKEDAANN+ARGHYTVGREI+ LDR+RKLAD C GLQGFL ++ +YGKKS Sbjct: 8 NVGQAGCQIGNACWELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGHYTVGREILGDVLDRIRKLADQCDGLQGFLFTHSLGGGTGSGLGSLLLEELSAEYGKKS 166 HSP 2 Score: 27.7202 bits (60), Expect = 4.281e-50 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F +YP+PQVST Sbjct: 164 KKSKLEFAVYPAPQVST 180
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 3.566e-49 Identity = 90/139 (64.75%), Postives = 111/139 (79.86%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDA--------FNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVF 569 HIGQAGIQ+G++CWELYCLEHGIQP+G + DT +A F+TFF ET +G+HVPRA+FVDLEP+VID +RTG +R LFHPEQL+SGKEDAANN+ARG Y+VG E++DL L+R RKLA+ C GLQGFL+F Sbjct: 8 HIGQAGIQIGDACWELYCLEHGIQPNGVV-LDTQQDQLENAKMEHTNASFDTFFCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSEVIDLVLERTRKLAEQCGGLQGFLIF 145 HSP 2 Score: 26.1794 bits (56), Expect = 3.566e-49 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 623 LIG*LWKEVKLGFTIYPSPQVST 691 L G ++ KL F++YP+P++ST Sbjct: 164 LTGEYSRKTKLEFSVYPAPRIST 186
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.748e-48 Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 HIGQAG Q+GN+CWELYC+EHG+ G + + + FFSE+ +G+HVPRA++VDLEP+V+DE+R G Y LFHP+Q+I+GKEDAANN+ARGHYT+G+E++D+ LDR+RK +NC GLQGFLVF + V++GKKS Sbjct: 12 HIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKS 168 HSP 2 Score: 28.1054 bits (61), Expect = 1.748e-48 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F++YP+PQVST Sbjct: 166 KKSKLEFSVYPAPQVST 182
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.748e-48 Identity = 91/159 (57.23%), Postives = 114/159 (71.70%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVG-ACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKKS 650 ++GQAG Q+GN+CWELY LEHGI+ DG + S + F+TFF ETG G+ VPRA++VDLEP+VIDEVRTG +++LFHPEQLI+GKEDAANN+ARGHYTVGREIVD +R+RK+AD C GLQGFL ++ +YGKKS Sbjct: 8 NVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERIRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKS 166 HSP 2 Score: 26.5646 bits (57), Expect = 1.748e-48 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F +YP+PQ+ST Sbjct: 164 KKSKLEFAVYPAPQLST 180
BLAST of FC920918 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 187.578 bits (475), Expect = 2.970e-48 Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 3 Query: 177 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFSAVXXXXXXXXXXXXXXXXXVDYGKK 647 H+GQAG Q+GNS WELY LEHG+ DG D++V +++TFF+E+ +G++VPR++FVDL+PS IDE+RTG YRQLFHPE LISGKEDAANN+ARGHYTVG+E+ + LDR+RK+ DNC LQGFLVF + DY KK Sbjct: 9 HLGQAGTQLGNSAWELYLLEHGLTQDGRKDPDSTVAGEGGSYDTFFTESSNGKYVPRSLFVDLDPSPIDEIRTGPYRQLFHPELLISGKEDAANNYARGHYTVGKEMAENVLDRIRKITDNCHSLQGFLVFHSFGGGTGSGFGALVLERLAQDYAKK 165 HSP 2 Score: 25.7942 bits (55), Expect = 2.970e-48 Identity = 9/17 (52.94%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 641 KEVKLGFTIYPSPQVST 691 K+ KL F++YP+P+V+T Sbjct: 164 KKCKLEFSVYPAPRVAT 180 The following BLAST results are available for this feature:
BLAST of FC920918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920918 ID=FC920918; Name=FC920918; organism=Citrus clementina; type=EST; length=691bpback to top |