FC920926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17 Identity = 59/163 (36.20%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKN-RQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 576 FKLV+VGD GKT V+R TG F + TIGV+ +++ WDTAGQE+F + YY AI+ +D++ R T+ +VP W D+ + NI +L GNK D+ + R+V +A+ + H L E SAK + N E+ F +A +L Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEH-YDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: YPTC5_CHLRE (GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 49/165 (29.70%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + +++ +F K+Y+ TIG + + + K+ WDTAGQE+F L +Y +++FDV ++ ++ W + +N P ++ GNK+D +RQV K+ K ++ Y+E SAK + N E F + R Sbjct: 10 KVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPFMVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITR 174
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 56/183 (30.60%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQV--TFHRKKNLQYYEISAKSNYNFEKPFLYLA----RKLAGDPNLHFVESPALAPPE 630 FKL+++GD G GK+ + R + + Y TIGV+ + I+ WDTAGQE+F + YY I+++DVT + ++ NV W ++ R EN+ +L GNK D+ +++V V F + + + E SAK+ N E+ F+ +A ++A P P + P E Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQE 191
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RB27B_MOUSE (Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG----------KIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEK 549 KL+ +GD G GKTTF+ R+ +F K+ T+G++ + K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D+ + R+V +Q K + Y+E SA + N EK Sbjct: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEK 172
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RASEF_DANRE (RAS and EF-hand domain-containing protein OS=Danio rerio GN=rasef PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 52/167 (31.14%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 97 PSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQV-TFHRKK-----NLQYYEISAKSNYNFEKPFLYLARKL 576 P ++LV+ GD G+GK++F+ R EF + T+GV+ + K WDTAGQE+F + Y+ ++++DVT+ ++ NV W + E+IP+ + GNKVD++ + + V + H +K N + E SAK N + L+LAR++ Sbjct: 466 PVYRLVLAGDAGSGKSSFLLRLSLNEFRGDIQTTLGVDFQIKKMLVDGEKTNLQIWDTAGQERFRSIARSYFRKAHGVLLLYDVTSESSFLNVREWVEQIRESTDEDIPMCIIGNKVDLRAARPEGSCVSSIHGEKLAMNYNALFCEASAKEGTNVIEAVLHLAREV 632
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB5_TOBAC (Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 57/173 (32.95%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPA 615 KLV++GD G GK++ V R + G+F + E TIG N ++F WDTAGQE++ L YY AII++D+T+ + W ++L + N+ + L GNK D+++ R+V A++ + ++N L + E SAK+ N F +A++L P ++PA Sbjct: 12 KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRL---PRAQPAQNPA 181
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = 1 Query: 82 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNL------QYYEISAKSNYNFEKPF 555 Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F + +++ WDTAGQE++ + YY I+M+DVT ++ +V W + +N ++L GNK D+++++V ++F R + L +++E SAK N N + F Sbjct: 16 QNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRV----ISFERGRQLADQLGVEFFETSAKENVNVKAVF 175
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 53/161 (32.92%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQ-VKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 576 FK +I+GD G GK+ + + F+ ++ TIGVE + +I+ WDTAGQE F + YY A++++D+T R T+ ++ +W D + N+ I+L GNK D+++R+ VK ++ F R+ L + E SAK+ N E+ F+ A+++ Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 51/161 (31.68%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 576 FK++++GD G GK+ + R + + TIGV+ + I+ WDTAGQE+F + YY Q I+++D T + ++ NV W ++ R CEN+ +L GNK D+ N +V + +F + + E SAK+ N E+ F+ +AR + Sbjct: 11 FKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 51/164 (31.10%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNL------QYYEISAKSNYNFEKPFLYLARKL 576 KL+++GD G GK+ + R F + TIG++ + +I+ WDTAGQE+F + YY ++++DVT + ++ NV TW ++ EN+ +L GNK D +++ +QV+F + + L ++ E SAK+N N ++ F LAR++ Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQ----RQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170 The following BLAST results are available for this feature:
BLAST of FC920926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920926 ID=FC920926; Name=FC920926; organism=Citrus clementina; type=EST; length=689bpback to top |