FC920926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 54/157 (34.39%), Postives = 84/157 (53.50%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-NRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLA 567 KL++VGD G GK+ + R + +F + TIG++ + +I+ WDTAGQE+F + YY ++++DVT +++NV W + + + E+ I L GNK D + NRQV +Q K N+ + E SAKSN N + F LA Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELA 172
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RB27B_RAT (Ras-related protein Rab-27B OS=Rattus norvegicus GN=Rab27b PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG----------KIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVD-VKNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEK 549 KL+ +GD G GKTTF+ R+ +F K+ T+G++ + K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D + R+V +Q K + Y+E SA + N EK Sbjct: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLLDQREVNERQARELAEKYGIPYFETSAATGQNVEK 172
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 56/184 (30.43%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRD-LCRVC---ENIPIVLCGNKVDVKNRQVKAKQVT-FHRKKNLQYYEISAKSNYNFEKPFLYLA-RKLAGDPNL---HFVESPALAPPE 630 KL+IVG G GKT+ + +++ F ++Y+ T+G + ++ WDT GQE+F + +Y I+ FDVT +++ + W D L ++ ++ P+VL GNK+D+ +R+V + + R+K++ Y+E+SAK++ N + F LA R L+ ++ H ES L+P + Sbjct: 10 KLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMVLLGNKIDLADRKVPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRYQSILENHLTESIKLSPDQ 193
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 57/184 (30.98%), Postives = 88/184 (47.83%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCE-----NIPIVLCGNKVDVKNRQVKAKQVTFHRKK----NLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPE 630 K+VI+G+ GKT+ ++R++ F +PTIGV+ + + WDT+GQE+F L YY + I++FDVT T ++ W D E P ++ GNK+D NR V K K NL Y++ SAK N N E+ F +++ + P + + PPE Sbjct: 9 KVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKIDDPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHISNQCENQPQSNEI------PPE 181
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB6B_CAEEL (Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 54/180 (30.00%), Postives = 90/180 (50.00%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEV 633 FKLV +G+ GKT+ + R + F+ Y+ TIG++ + +R WDTAGQE+F L Y A++++D+T ++ W D+ ++ I+L GNK D+ + RQV + K+ N+ + E SAK+ YN ++ F +A L G ++ + PP V Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPG-----IIKDDPVEPPNV 185
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 57/182 (31.32%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 67 ALPNQ--QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYN----FEKPFLYLARKLA 579 A P Q Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F +++ WDTAGQE++ + YY I+M+D+T ++ +V W + EN +VL GNK D+ + +V + +Q+ + L+++E SAK N N FEK + K+A Sbjct: 10 ATPGQPDQNFDY-MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLA--DQLGLEFFETSAKENINVKAVFEKLVEIICDKMA 188
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 48/165 (29.09%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 76 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 555 + Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 48/165 (29.09%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 76 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 555 + Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 48/165 (29.09%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 76 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 555 + Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 48/165 (29.09%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 76 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 555 + Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176 The following BLAST results are available for this feature:
BLAST of FC920926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920926 ID=FC920926; Name=FC920926; organism=Citrus clementina; type=EST; length=689bpback to top |