FC920943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_HUMAN (Proteasome subunit alpha type-4 OS=Homo sapiens GN=PSMA4 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.328e-71 Identity = 131/214 (61.21%), Postives = 166/214 (77.57%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD-DISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL +TMD + L+++K+E+A Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_BOVIN (Proteasome subunit alpha type-4 OS=Bos taurus GN=PSMA4 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.328e-71 Identity = 131/214 (61.21%), Postives = 166/214 (77.57%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD-DISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL +TMD + L+++K+E+A Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_RAT (Proteasome subunit alpha type-4 OS=Rattus norvegicus GN=Psma4 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.346e-71 Identity = 131/214 (61.21%), Postives = 166/214 (77.57%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD-DISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL +TMD + L+++K+E+A Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_MOUSE (Proteasome subunit alpha type-4 OS=Mus musculus GN=Psma4 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.346e-71 Identity = 131/214 (61.21%), Postives = 166/214 (77.57%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD-DISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDPSGNYGGWK S+LKQDYK+ +++ + A+ LA+KVL +TMD + L+++K+E+A Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_MACFA (Proteasome subunit alpha type-4 OS=Macaca fascicularis GN=PSMA4 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.414e-71 Identity = 130/214 (60.75%), Postives = 166/214 (77.57%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD-DISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 MSRRYDSRTTIFSPEGRLYQVEYAMEAIG+AG+ +GIL+ DGV+L E++ KLL +EK+YK+++ +AC+VAGI SDAN+L N R+ AQRY YQEP+P EQLV +LCD KQ YTQFGG RPFGVS L+ GWDK+YGFQLY SDP+GNYGGWK S+LKQDYK+ +++ + A+ LA+KVL +TMD + L+++K+E+A Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPNGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 2.468e-66 Identity = 127/213 (59.62%), Postives = 158/213 (74.18%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 M+RRYDSRTTIFSPEGRLYQVEYAMEAI +AG+ +GILS +G+V+ E+K KLL S TEK+Y++ D+++C VAGI +DANILIN R A Y +Y E MPVEQLVQ+LC+ KQ YTQ GG RPFGVS L+ GWDK+YG+QLY SDPSGNY GWK ++LKQ+YK + EEA QLA+KVL +T+D L S+K+E+A Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP-NLEEAKQLAIKVLWKTLD-VKLASEKVEMA 211
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_DROME (Proteasome subunit alpha type-4 OS=Drosophila melanogaster GN=Pros29 PE=1 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 3.223e-66 Identity = 121/217 (55.76%), Postives = 161/217 (74.19%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD----DISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 M+RRYDSRTTIFSPEGRLYQVEYAMEAI +AG+ +GIL++DG++L E + T+KLL ++ +EK+Y+++D++ C+VAGI SDAN+L + R+ AQRY ++Y E +P EQLV LCD KQ YTQ+GG RPFGVS L+ GWD YG+QLY SDPSGNYGGWK S+LKQ+ D ++ +A LA+KVL T+D+T LT +K+E+A Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIKVLSMTLDTTKLTPEKVEMA 217
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.830e-54 Identity = 107/219 (48.86%), Postives = 147/219 (67.12%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD----DISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 M+R +DSRTTIFSPEGRLYQVEYAMEA +G+ +G+L+K+GV+L E+ V KL+ TS ++ +++++AC G +D N+L+N R+ AQ+Y + + E +P EQLV +LCD KQ YTQ+GG RPFGVSFL+ GWD +GFQLY SDPSGNY GWK +L+++ S EEA +A+KV+ T+ SLT +KLE+A V Sbjct: 1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSV-DKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSLTPEKLEIAFV 218
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.172e-46 Identity = 93/211 (44.08%), Postives = 142/211 (67.30%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ Y Y EP PV +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y+DD++ E+A++LAL L +TM++ S +D +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPD-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAG--INDRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENPS--ADNIEVAVI 215
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46 Identity = 92/211 (43.60%), Postives = 143/211 (67.77%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+DDI +++A++LA+ L +T++ T++ +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP--TAEGIEVAYI 215 The following BLAST results are available for this feature:
BLAST of FC920943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920943 ID=FC920943; Name=FC920943; organism=Citrus clementina; type=EST; length=715bpback to top |