FC920943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46 Identity = 92/211 (43.60%), Postives = 143/211 (67.77%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+DDI +++A++LA+ L +T++ T++ +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP--TAEGIEVAYI 215
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.078e-45 Identity = 92/209 (44.02%), Postives = 140/209 (66.99%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ YKDD+S EEA++LA+ L +TM+ S ++ +E+A Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPS--AENIEVA 213
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45 Identity = 91/211 (43.13%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I + Y+DD++ +EA++LA+ L +TM+ S ++ +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTMEKPS--AENIEVAVI 215
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45 Identity = 92/211 (43.60%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QV+YA EA+ +A+G+ KDGVVL EK+VTSKL++ S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+D+++ EEA++LA+ L + M+ S S ++ + V Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMTLEEAIKLAVLALSKIMEEPSPESIEVAVISV 217
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.350e-45 Identity = 92/211 (43.60%), Postives = 139/211 (65.88%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QV YA EA+ +A+G+ K GVVL EK++TS+L++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y DDI E A++LA+ L +T++ S + +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAILALAKTLEEPS--PESIEVAYI 215
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.988e-45 Identity = 92/192 (47.92%), Postives = 131/192 (68.23%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 644 YD T+FSPEGRLYQVEYA EA+ +AIGI KDGVVL ++++TSKL++ S EK+++IDDHVA A +G+++DA +LI+ AR++AQ Y Y E + +E L + +CD KQ YTQ GG+RPFGVS L AG DKN +L+ +DPSG +K +L+++Y+DDI+ +E ++LA+ L Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIR-SIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEA-RLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITAL 198
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.126e-45 Identity = 91/211 (43.13%), Postives = 139/211 (65.88%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QV YA EA+ +A+G+ K+GVVL EK++TSKL++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y W+ +I + Y DD+ E A++LA+ L +T++ S + +E+A + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLEEPS--PESIEVAYI 215
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.655e-44 Identity = 91/211 (43.13%), Postives = 139/211 (65.88%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QVEYA EA+ +A+GI ++GVVL +K+VTSKL++ S EK+Y+ID H+ A AG+++DA +L+ AR++AQ Y Y Y EP+ V+ LV+++CD KQ YTQ GG+RPFG + L AG D G +L+ +DPSG K + +++Y++D++ +EA++LA++ L + T+D LE+A V Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPE-SIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEA-SREETTADNLEIAVV 217
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.008e-43 Identity = 90/211 (42.65%), Postives = 138/211 (65.40%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD T+FSP+GRL+QVEYA EA+ +AIGI K+GV+L+ +K+V SKLL+ T EK+YKID+H+ A +G+++DA +LI+ AR++AQ Y EP+ V++L + +CD KQ YTQ+GG+RPFGVS L AG D+ +LY +DPSG +K +++Y+DD+S ++A+ L L + +++S L + +E+ V Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADT-IEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVP--KLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIES-ELVPENIEVGYV 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.748e-41 Identity = 92/217 (42.40%), Postives = 132/217 (60.83%), Query Frame = 3 Query: 51 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 P YD TIFSPEG++YQVEYA EA+ +G+ K GVVL EK+ S L +S S EK+Y ID+HVA + +G+++DA ILI+ AR A + + Y EP+ VE L +++C+ KQ YTQFGG RPFGV+ L AG D+ +G +LY +DPSG Y G+ L+++YK D+ E ++LALK L ++ T + ++ A + Sbjct: 3 PPAMAGYDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSS-SLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDR-HGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALKALASAVEITDSANVEVAYATI 217 The following BLAST results are available for this feature:
BLAST of FC920943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920943 ID=FC920943; Name=FC920943; organism=Citrus clementina; type=EST; length=715bpback to top |