FC920949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_DICDI (40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.115e-14 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEA-LGMNEIPGLVRVD 214 AGF THLM RI NGPVRGIS KLQE ERE+R ++VP ESAIKT+++++D+ +ML++ L IP + VD Sbjct: 51 AGFCTHLMRRIANGPVRGISYKLQEEEREKRDNYVPQESAIKTNEVKIDRDVEEMLKSTLEFPTIPQIHVVD 122
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_NEUCR (40S ribosomal protein S17 OS=Neurospora crassa GN=rps-17 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.456e-14 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAI------KTDQIEVDKATLDMLEALGMNEIP----GLVRVDPVAPGVEFG 241 AG++THLM RIQ GPVRGIS KLQE ERER+ +VP+ SA+ ++ Q++VD T D+L+ LG + IP + + PV G FG Sbjct: 51 AGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSIPVNVIPVTQAQPVERGRRFG 140
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_ANOGA (40S ribosomal protein S17 OS=Anopheles gambiae GN=RpS17 PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 1.456e-14 Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPG 229 AGF THLM R+++ VRGIS+KLQE ERERR ++VPD SA++ D IEVD T +ML+ L N I + +P APG Sbjct: 51 AGFVTHLMKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNIV-VQLTNPTAPG 125
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_RAT (40S ribosomal protein S17 OS=Rattus norvegicus GN=Rps17 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_PIG (40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_MOUSE (40S ribosomal protein S17 OS=Mus musculus GN=Rps17 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_ICTPU (40S ribosomal protein S17 OS=Ictalurus punctatus GN=rps17 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_HUMAN (40S ribosomal protein S17 OS=Homo sapiens GN=RPS17 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_FELCA (40S ribosomal protein S17 OS=Felis catus GN=RPS17 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_CRIGR (40S ribosomal protein S17 OS=Cricetulus griseus GN=RPS17 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128 The following BLAST results are available for this feature:
BLAST of FC920949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920949 ID=FC920949; Name=FC920949; organism=Citrus clementina; type=EST; length=242bpback to top |