FC920954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_METM5 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps15p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.117e-31 Identity = 65/150 (43.33%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 532 M R+HS +G S S P + P W+ +S++++E I + AK G + IG ILRD +G+ VK +TG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 1 MARLHSGKRGSSGSTRPLRTEVPEWVSMSAEEIEAKIVEMAKDGKQSAIIGNILRDMYGVPNVKLITGKSVSSIMKEAGFYAEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPETARLLV 150
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_SULAC (30S ribosomal protein S15P/S13e OS=Sulfolobus acidocaldarius GN=rps15p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.555e-30 Identity = 66/144 (45.83%), Postives = 94/144 (65.28%), Query Frame = 2 Query: 101 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 532 R KG S S P + PP W++ + ++VE + + AK+G PS IG++LRD +G+ VK +TG K+ IL+ + P+IPEDL++L+++AV IR+HL KDK +K L VES+I RLA YYK+T KLP W Y+ A LV Sbjct: 5 RAKGNSHSIRPVRSGPPKWVRFTREEVELLVEELAKRGYPPSMIGMVLRDQYGVPLVKQITGRKLTAILQDRNMKPKIPEDLFNLMRRAVNIRRHLFEYPKDKSAKRGLEEVESKIRRLASYYKETGKLPQEWSYDPAKAELLV 148
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_METS5 (30S ribosomal protein S15P/S13e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps15p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30 Identity = 66/145 (45.52%), Postives = 93/145 (64.14%), Query Frame = 2 Query: 101 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 535 R G S S P + P W++ S ++VE I + AKKG TPS IG++LRD +GI K + G K+ + LK GLA +IPEDL++LI++AV +R+HL DK +K L +ES+I RL+RYYK+ +KLP W Y+ A LV+ Sbjct: 5 RANGSSHSTRPVRTGSPKWVRFSREEVEMLIEELAKKGYTPSMIGIVLRDQYGIPLAKPIIGKKVNQFLKDKGLASQIPEDLFNLIRRAVNVRRHLNEYPGDKTAKKGLEEIESKIRRLSRYYKRVEKLPQDWTYDPAKAELLVS 149
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_CALMQ (30S ribosomal protein S15P/S13e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps15p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30 Identity = 68/133 (51.13%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 107 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 505 +G S S P +T P WL S +DVE + + A++G TPS IGVILRD +GI VK VT +I IL+ +GL P+IPEDL LI++AV IR+HLE + KD +K L+L ES+IHRL +YYK+T LP + Y Sbjct: 9 RGSSGSVRPATKTIPPWLSYSPEDVERLVVELARRGFTPSLIGVILRDQYGIPLVKIVTNKRITEILEENGLKPQIPEDLMALIRRAVNIRRHLEEHPKDMSAKKGLLLTESKIHRLIKYYKRTGVLPLDFTY 141
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_METMJ (30S ribosomal protein S15P/S13e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps15p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.718e-30 Identity = 61/150 (40.67%), Postives = 95/150 (63.33%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 532 M RM++R +G S+S PY++ P W + ++E + K G++ SQIG++LRD + + VK TG +I IL+ GL EIPEDL +L++KA+ IRKHL N KD +K +L + ES++ RL +YY ++ ++P W Y+ TA L+ Sbjct: 1 MARMYARRRGTSSSVRPYRKEAPEWSNTDATEIEKIVVDLRKDGMSTSQIGLVLRDRYAVPDVKLATGKRIGEILREKGLESEIPEDLRNLMEKALGIRKHLAENNKDVHNKRQLQIAESKVRRLVKYYVRSGRMPKGWTYKPETAEILL 150
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_AERPE (30S ribosomal protein S15P/S13e OS=Aeropyrum pernix GN=rps15p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.718e-30 Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 2 Query: 101 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 535 R KG S S P PP WL + +++E I + AKKG PS IG+ILRD +GI VK + G + +L+ GL P +PEDL LI+KAV +R+HL+ + KD +K LI +ES+I RL +YYK+ LPP WKY+ A LV+ Sbjct: 5 REKGQSHSTRPPHPQPPQWLVFTPEEIELLIAELAKKGYGPSMIGIILRDQYGIPLVKPILGKGVSEVLREKGLHPPLPEDLLMLIRKAVNLRRHLDEHPKDYHAKKGLIDLESKIRRLVKYYKRRGVLPPDWKYDPEAAKLLVS 149
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_METBF (30S ribosomal protein S15P/S13e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps15p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29 Identity = 63/150 (42.00%), Postives = 95/150 (63.33%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 532 M +MH++ KG S+S P + PP W KI +++V K+G++ ++IG+ LRD +G+ K +TG KI ILK + + P +PEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YY++ K LP W Y+ TA ++ Sbjct: 1 MAKMHTKRKGKSSSTRPIRTEPPEWCKIGAEEVTTITLDLWKQGVSTAEIGMTLRDRYGVPDAKLITGKKITTILKENNVYPNVPEDLTNLIVKALRLRKHLSVNKKDVHNKRALNLTESKIRRLVKYYQQEKVLPRDWFYKPETAEMMI 150
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_HYPBU (30S ribosomal protein S15P/S13e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps15p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.316e-29 Identity = 66/145 (45.52%), Postives = 90/145 (62.07%), Query Frame = 2 Query: 101 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 535 R KG S S P T P W++ +++E+ I A+KG PS IG+ILRD GI VK + G I +L+ G+ +PEDL+ LI+KAV +R+HLE + KD +K L+ +ES+I RLA YYK+ KLP WKY+ A LVA Sbjct: 6 RKKGRSHSTRPATPTVPKWIQYDPEEIEEIIVDLARKGYGPSMIGIILRDQFGIPLVKPILGKSITEVLEERGIKMVVPEDLFRLIEKAVNLRRHLEEHPKDTHAKKGLLDLESKIRRLAEYYKRVGKLPRDWKYDPQQAKLLVA 150
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_METBU (30S ribosomal protein S15P/S13e OS=Methanococcoides burtonii (strain DSM 6242) GN=rps15p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.719e-29 Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 532 M +MH+R KG S S P + P+W +++++ + K+G + S IG++LRD++G+ VK TG K+ IL+ + P +PEDLY+LI KA+ +RKHL N KD +K L ES+I RL +YY+ TK LP WKY+ TA L+ Sbjct: 1 MAKMHTRTKGKSGSTKPIRSESPAWSTATTEEITKVVLDLWKQGNSTSVIGMVLRDNYGVPDVKLATGKKVTEILRDNSEEPNVPEDLYNLIVKAIGLRKHLVVNNKDVHNKRSLQSAESKIRRLVKYYQSTKVLPIDWKYKPETAEMLI 150
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS13_ENCCU (40S ribosomal protein S13 OS=Encephalitozoon cuniculi GN=RPS13 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 60/140 (42.86%), Postives = 86/140 (61.43%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 502 M +MHS GKG S S PY P+WL S +++ ++ + KG+ IG LRD +GI + V G I R L+ +G+ P+IP DL L+ +A +R HL RKD +K+RLILV SR++R+ARYYK+ ++P WK Sbjct: 1 MAKMHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSSRMYRVARYYKRKMRIPGNWK 140 The following BLAST results are available for this feature:
BLAST of FC920954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920954 ID=FC920954; Name=FC920954; organism=Citrus clementina; type=EST; length=682bpback to top |