FC920954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_NATPD (30S ribosomal protein S15P/S13e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps15p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22 Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTK 481 M RMHSR +G S S P PP W ++ +ED + + A++G PSQIG+ LRD + VK TG K+ IL+ + E+PEDL +L+++A+ +R+H++RN D +K L ES+I RL YY+ K Sbjct: 1 MARMHSRRRGSSGSDRPTADEPPEWSEVDEDAIEDRVVELAEEGYDPSQIGLKLRDEGVQGVPVPDVKLATGKKVTEILEENDAENELPEDLRNLMERAIRLREHMDRNPGDAQNKRALQNTESKIRRLVDYYRGDK 137
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_THEVO (30S ribosomal protein S15P/S13e OS=Thermoplasma volcanium GN=rps15p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21 Identity = 53/139 (38.13%), Postives = 81/139 (58.27%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 499 M RMH+R +G S S Y P+W++ S ++ + K G+T S +G+ LRD +G+ VK++ G K+ ++L G+ EIPEDL LIK+ + KH+E N KD +K L+ +++ RL RYYK+T L W Sbjct: 1 MARMHTRKRGKSGSKKVYG-VEPNWVQYSKDEILNIAVDLKKSGMTSSVVGIRLRDQYGVPTVKAIFGKKLNKLLAEKGIRDEIPEDLNSLIKRYNNVAKHVELNPKDHSNKRGRDLIMAKMLRLVRYYKRTGVLDQKW 138
BLAST of FC920954 vs. ExPASy Swiss-Prot
Match: RS15_HALMA (30S ribosomal protein S15P/S13e OS=Haloarcula marismortui GN=rps15p PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.783e-18 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 83 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK 472 M RMH+R +G S S P PP W + +E + + A++G +PS+IG+ LRD I V TG K+ IL+ + P++PEDL +L+++AV +R H++ N D +K L +S+I RL YY+ Sbjct: 1 MARMHTRRRGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDYYR 134 The following BLAST results are available for this feature:
BLAST of FC920954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920954 ID=FC920954; Name=FC920954; organism=Citrus clementina; type=EST; length=682bpback to top |