FC920963

Overview
NameFC920963
Unique NameFC920963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42
Identity = 91/166 (54.82%), Postives = 109/166 (65.66%), Query Frame = 1
Query:   40 MSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-----SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVI--HGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 516
            MSVTLHT LGD+K  I C+ VPKTAENFLALCASGYY+ + FHR I  FM+Q                 SI+G  F DEIR  L+HN RGI+SMAN GPNTNGSQFFI + K PHL+GL TV G++I     + L  +E  +    +R   E+RI RVT+HANPLA
Sbjct:    1 MSVTLHTTLGDLKIEIFCESVPKTAENFLALCASGYYNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKLIGDESLQTLAKLEGLEVDKKNRIKEEVRIERVTVHANPLA 166          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.913e-38
Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTIHANP 510
            V LHTN GD+   + CD  PKT ENF+ LC   YYDGTIFHR+I+ F+IQ            S WGK F DE R +L H  RGILSMANSGPN+N SQFFI++    +L+  +T+ GRV+ GF+VL  ME  ++    DRP  EIRI+  T+  +P
Sbjct:  282 VRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDP 437          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 75/156 (48.08%), Postives = 96/156 (61.54%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTIHANP 510
            V LHTN GD+   + CD  PKT ENF+ LC   YYDGTIFHR+I+ F+IQ            S WGK F DE R +L H  RG+LSMANSGPNTN SQFFI++    +L+  +T+ GRV+ GF+ L  ME  ++    DRP  E+ I   T+  +P
Sbjct:  282 VRLHTNKGDLNLELHCDLTPKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRPKEEVLICTTTVFVDP 437          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 74/151 (49.01%), Postives = 98/151 (64.90%), Query Frame = 1
Query:   58 TNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 510
            TN G+I   +  D+ PKT  NF+ L  +GYY+  IFHRNIK FMIQ            SIW + F DEI+ +LKH+ARG+LSMAN G +TNGSQFFI+YA  PHL+GL+TV G+V+ G +VL  +E       DRP  EI+I ++ +  +P
Sbjct:  292 TNYGNINVELFSDKKPKTCHNFIELAKTGYYNDVIFHRNIKKFMIQGGDPTGTGKGGESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVGGLDVLSKLESIPVDEKDRPEREIKIKQIQMFVDP 442          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35
Identity = 71/155 (45.81%), Postives = 88/155 (56.77%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 510
            V   T  GD+   + CD  P+  ENF+ LC  GYY+G  FHR+I+ FMIQ            SIWGK F DE    L H+ RG++SMANSGP+TNGSQFF+ Y    HLN  +TV G V+ G   L  ME       DRPL EI+I   ++  NP
Sbjct:  346 VQFQTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEEIKIIEASVFVNP 500          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33
Identity = 75/153 (49.02%), Postives = 95/153 (62.09%), Query Frame = 1
Query:   37 KMSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVT 495
            + +VTL T +GDI   +  +  PK  +NF  L   GYYD TIFHR IK FMIQ            SI+GKKF DEI + LKH   GILSMANSG N+NGSQFFI++   P L+G +T+ GRV  G +V+  M   QT + D+P+ EIRI + T
Sbjct:    3 EQTVTLQTTVGDITLELYYNHAPKACKNFYELSKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGGESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGMKVVQKMNAMQT-NNDKPIDEIRIIKAT 154          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32
Identity = 71/151 (47.02%), Postives = 85/151 (56.29%), Query Frame = 1
Query:   58 TNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 510
            TN G+I   +  D  P    NF+ L   GYY  TIFHRNI  FMIQ            SIWGK F DE    LKH+ RGI+SMAN G NTNGSQFFI Y    HL+  +T+ GRV+ G  VLD +EK  T S D P   I++  + I  +P
Sbjct:  282 TNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLEDIIIFVDP 432          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32
Identity = 70/151 (46.36%), Postives = 89/151 (58.94%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            VT  T++G     +     PKT +NF  L   GYY+  IFHR I  FM+Q            SI+G+KF DEIR  LKH   GILSMANSGPNTNGSQFFI+ A  P L+G +T+ GRV  G  ++  M   +T + DRPL E++I R  +
Sbjct:    5 VTFDTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNNEDRPLDEVKILRAKV 155          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32
Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 1
Query:   37 KMSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRE--SLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFE--VLDLMEKAQTGSG-DRPLAEIRINRVTIHANP 510
            K  V L TN G +   + C + PKT  NFL LC  G YD T+FHRNI GFMIQ            SIW   F DE  E  + KH+ RG+LSMAN G +TN SQFFI+Y   PHL+G +TV GR++ G +   L  ME+  +  G DRPL +I+I  V +  +P
Sbjct:  292 KAYVRLSTNFGALNLELHCGKAPKTCFNFLQLCKHGKYDDTLFHRNIPGFMIQGGDPTGTGRGGSSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQGTDRPLKKIQIQDVLVTEDP 454          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibberella zeae GN=CYP1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.548e-31
Identity = 68/152 (44.74%), Postives = 89/152 (58.55%), Query Frame = 1
Query:   43 SVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            ++ L T +G +   +     PKT  NF  L   GYYD TIFHR I  FM+Q            SI+G+KF DEI   LKH   GILSMAN+GPNTNGSQFF++ A  P L+G +T+ GRV  G   +  M   +TGS DRP+ E++I +  +
Sbjct:    4 NIVLETTMGSLILELYTTHAPKTCNNFTTLVRRGYYDNTIFHRIIPNFMVQGGDPTGTGRGGSSIFGEKFEDEIDPGLKHTGAGILSMANAGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMGTIKRMGLVKTGSEDRPVEEVKIVKARV 155          
The following BLAST results are available for this feature:
BLAST of FC920963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
PPIL3_NEUCR4.343e-4254.82Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIL2_HUMAN2.913e-3850.00Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL2_MOUSE7.175e-3748.08Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_RHIOR2.087e-3649.01Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]
PPIL2_ARATH5.142e-3545.81Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
CYPE_DICDI2.821e-3349.02Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIL2_SCHPO1.072e-3247.02Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL1_EMENI2.388e-3246.36Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL2_USTMA6.949e-3246.01Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPIL1_GIBZE1.548e-3144.74Peptidyl-prolyl cis-trans isomerase-like 1 OS=Gibb... [more]

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Properties
Property NameValue
Genbank descriptionC32201D07EF RVDevelopN Citrus clementina cDNA clone C32201D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920963 ID=FC920963; Name=FC920963; organism=Citrus clementina; type=EST; length=722bp
GATATAAATTCTGAGCTTTGGTTTGGCGTAGGCGGTAAGATGTCGGTAAC
TCTACACACTAATCTGGGTGATATTAAGTGCGGGATTGCTTGCGACGAAG
TCCCTAAGACGGCTGAGAATTTTTTGGCACTATGCGCGAGTGGTTACTAC
GATGGGACCATTTTTCACCGGAATATTAAAGGTTTTATGATTCAAGGTGG
AGACCCAACAGGCACTGGAAAAGGCGGAACAAGCATATGGGGCAAGAAGT
TCAATGATGAGATAAGGGAGTCCCTCAAGCATAATGCTAGAGGGATACTG
TCAATGGCCAATAGTGGCCCTAACACTAATGGAAGCCAATTCTTCATCTC
TTATGCAAAGCAGCCCCATCTTAACGGATTGTACACTGTGCTTGGTAGAG
TAATTCATGGGTTCGAAGTTCTTGACCTTATGGAAAAGGCTCAAACTGGA
TCAGGGGACCGGCCACTTGCGGAGATAAGGATCAATCGAGTTACCATACA
TGCTAACCCACTTGCTGTCTAGCTTTGTCTGAAAATTTCTTGTTGTATAA
CATTGTAAAGAGGCTTAGTGTGGAGTGGGAACAGTGACTTACGATTAAAC
TCCCAGTAGACTCTGTACATTTTTCTTTTCCCAGTTATGACTATGGGCTT
GAAGGAAGAAAGTACCGCAGAATTTTATGTAGCATCAAATGGTGAGATTG
ACGATTGAGAAACGTTAGTAAT
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