FC920963

Overview
NameFC920963
Unique NameFC920963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 62/138 (44.93%), Postives = 77/138 (55.80%), Query Frame = 1
Query:   55 HTNLGDIKCGIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSG 456
            +T  G I+  +  D VPKTAENF ALC   +G+ Y  + FHR I  FM Q             SI+G KF DE    LKH   G LSMAN+G NTNGSQFFI   K   L+G + V G+V+ G  V+  ME+  + SG
Sbjct:  165 NTLAGRIEIELRGDVVPKTAENFRALCTGEAGFGYKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDE-NFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASG 301          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 60/134 (44.78%), Postives = 75/134 (55.97%), Query Frame = 1
Query:   67 GDIKCGIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSG 456
            G I+  +  D VP TAENF  LC    G+ + G+ FHR I  FM Q             SI+GKKF+DE    LKH   G+LSMANSGPNTNGSQFF++  K   L+G + V G V  G +VL  +E   +  G
Sbjct:  154 GRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEARGSKDG 286          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 1
Query:   94 DEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSG 456
            D VPKTAENF ALC    G+ Y G+ FHR I  FM+Q             SI+G KF DE  +   H+  G+LSMAN+GPNTNGSQFFI+    P L+G + V G V+ G++++  +E   + SG
Sbjct:   25 DIVPKTAENFRALCTGEKGFGYAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKK-HHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSG 148          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 60/136 (44.12%), Postives = 76/136 (55.88%), Query Frame = 1
Query:   61 NLGDIKCGIACDEVPKTAENFLALCASGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSG 456
            +LG I   +  D VPKTA+NF  LC       Y G+ FHR I GFM+Q             SI+G+KF DE  E LKH   GILSMAN G +TNGSQFFI+  K   L+  + V G V+ G +V+  + K  + SG
Sbjct:   19 SLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFE-LKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESG 153          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18
Identity = 59/134 (44.03%), Postives = 78/134 (58.21%), Query Frame = 1
Query:   67 GDIKCGIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSG 456
            G I+  +  D VPKTA+NF ALC    G+ Y G+ FHR I  FM+Q             SI+G+KF DE    LKH+  G+LSMAN+GPNTNGSQFFI+      L+G + V G+V    E++  +E   + SG
Sbjct:   15 GRIEFQLFEDVVPKTAKNFRALCTGEQGFGYKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADE-NFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASG 147          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18
Identity = 54/132 (40.91%), Postives = 74/132 (56.06%), Query Frame = 1
Query:   52 LHTNLGDIKCGIACDEVPKTAENF-------LALCASG-YYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVL 423
            + TN G I   +  ++ P T  NF       LA+C    +Y G  FHR IK FMIQ               G +F DE   +L+H++ G+LSMAN+GP TNGSQFFI++   P L+G +TV G+V+ G EV+
Sbjct:   44 METNRGTIVLSLFFEKAPLTVCNFVGLAEGTLAVCKGRPFYQGLTFHRVIKDFMIQGGDPQGNGTGGP---GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVV 172          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18
Identity = 58/143 (40.56%), Postives = 74/143 (51.75%), Query Frame = 1
Query:   64 LGDIKCGIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRP 465
            +G I   +  D  P+TAENF   C   Y        Y    FHR IK FMIQ             SI+G KF DE  E LKH   G+LSMAN+G +TNG QFFI+ AK   L+  + V GRV+ G   +  +E   TG+ ++P
Sbjct:   30 IGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFE-LKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKP 171          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18
Identity = 61/141 (43.26%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   67 GDIKCGIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSG 456
            G +  G+    VPKTAENF ALC        SG   +Y G+ FHR I  FMIQ             SI+G+KF DE    LKH   G+LSMANSG +TNGSQFFI+      L+G + V G+V+ G +V+  +E     SG
Sbjct:   46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADE-NFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSG 185          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 60/130 (46.15%), Postives = 75/130 (57.69%), Query Frame = 1
Query:   64 LGDIKCGIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDE--IRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLME 435
            LG I   +  D++ KTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE  IR   KH   GILSMAN+GPNTNGSQFFI  AK   L+G +   G+V     +++ ME
Sbjct:   17 LGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIR---KHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAME 143          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CWC27_GIBZE (Peptidyl-prolyl isomerase CWC27 OS=Gibberella zeae GN=CWC27 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18
Identity = 65/188 (34.57%), Postives = 84/188 (44.68%), Query Frame = 1
Query:   43 SVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIW-------------------------GKKFNDEIRESLKHNARGILSMAN-SGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSG------DRPLAEIRINRVTIHANP 510
            SV +HT  G++   +   + P T  NFL L   GYYD TIFHR + GF++Q            SI+                         G  F DE    LK N RG+L  AN S P+TN SQFF +      LNG  T+ GR I G  V +L   A+ G G      +RP   ++I R+ I  NP
Sbjct:   14 SVIIHTTRGELSVELFAKQAPLTCRNFLQLALDGYYDNTIFHRLVPGFILQGGDPTGTGNGGESIYDGGAFSGDLDPWPMDQRMGKNAGPTGINFKDEFHSRLKFNRRGLLGSANESRPDTNSSQFFFTLDTAEELNGKNTMFGR-IAGDTVYNL---AKMGEGEVDEATERPTYPVKIERIEILINP 197          
The following BLAST results are available for this feature:
BLAST of FC920963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
PPIE_RHIOR1.151e-1844.93Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIE_PONAB1.151e-1844.78Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
CYPH_YEAST1.151e-1845.60Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CYPH_ENCCU1.151e-1844.12Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPIA2_RHIOR1.503e-1844.03Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIB_TREPA1.963e-1840.91Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
CYP11_CAEEL1.963e-1840.56Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
CP19D_ARATH1.963e-1843.26Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PAL4B_HUMAN3.348e-1846.15Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
CWC27_GIBZE3.348e-1834.57Peptidyl-prolyl isomerase CWC27 OS=Gibberella zeae... [more]

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Properties
Property NameValue
Genbank descriptionC32201D07EF RVDevelopN Citrus clementina cDNA clone C32201D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920963 ID=FC920963; Name=FC920963; organism=Citrus clementina; type=EST; length=722bp
GATATAAATTCTGAGCTTTGGTTTGGCGTAGGCGGTAAGATGTCGGTAAC
TCTACACACTAATCTGGGTGATATTAAGTGCGGGATTGCTTGCGACGAAG
TCCCTAAGACGGCTGAGAATTTTTTGGCACTATGCGCGAGTGGTTACTAC
GATGGGACCATTTTTCACCGGAATATTAAAGGTTTTATGATTCAAGGTGG
AGACCCAACAGGCACTGGAAAAGGCGGAACAAGCATATGGGGCAAGAAGT
TCAATGATGAGATAAGGGAGTCCCTCAAGCATAATGCTAGAGGGATACTG
TCAATGGCCAATAGTGGCCCTAACACTAATGGAAGCCAATTCTTCATCTC
TTATGCAAAGCAGCCCCATCTTAACGGATTGTACACTGTGCTTGGTAGAG
TAATTCATGGGTTCGAAGTTCTTGACCTTATGGAAAAGGCTCAAACTGGA
TCAGGGGACCGGCCACTTGCGGAGATAAGGATCAATCGAGTTACCATACA
TGCTAACCCACTTGCTGTCTAGCTTTGTCTGAAAATTTCTTGTTGTATAA
CATTGTAAAGAGGCTTAGTGTGGAGTGGGAACAGTGACTTACGATTAAAC
TCCCAGTAGACTCTGTACATTTTTCTTTTCCCAGTTATGACTATGGGCTT
GAAGGAAGAAAGTACCGCAGAATTTTATGTAGCATCAAATGGTGAGATTG
ACGATTGAGAAACGTTAGTAAT
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