FC920968
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17_CANFA (40S ribosomal protein S17 OS=Canis familiaris GN=RPS17 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.080e-38 Identity = 77/122 (63.11%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRVDP 450 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKRIQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17_NEUCR (40S ribosomal protein S17 OS=Neurospora crassa GN=rps-17 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38 Identity = 82/129 (63.57%), Postives = 104/129 (80.62%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAI------KTDQIEVDKETLDMLEALGMNEIPGLVRVDPV 453 MGRVRTKTVKKS++ +IERYY ++TLDF TNK+I +E+AII SKRLRNKIAG++THLMKRIQ+GPVRGIS KLQEEERER+ +VP+ SA+ ++ Q++VD ET D+L+ LG + IP V V PV Sbjct: 1 MGRVRTKTVKKSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSIP--VNVIPV 127
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17_RAT (40S ribosomal protein S17 OS=Rattus norvegicus GN=Rps17 PE=2 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 3.547e-38 Identity = 77/122 (63.11%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRVDP 450 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK LRNKIAG+ THLMKRIQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17_DROME (40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 6.690e-37 Identity = 77/122 (63.11%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRVDP 450 MGRVRTKTVKK+++ +IE+YY+R+TLDFHTNK+I EEVAIIP+K LRNKIAG+ THLM R++ VRGIS+KLQEEERERR ++VP SA++ D IEVD +T +ML+ L + I GL P Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17_CAEEL (40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.262e-35 Identity = 74/115 (64.35%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQ---IEVDKETLDMLEALGMN 420 M RVRTKTVKK+SR +IE+YY+RMT DFH NK++ +EVAII SK LRNKIAG+ THLM+RI++GPVRGIS+KLQEEERERR +++P+ S + Q I+VD +T DML+A G N Sbjct: 1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRRIERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGFN 115
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17B_YEAST (40S ribosomal protein S17-B OS=Saccharomyces cerevisiae GN=RPS17B PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35 Identity = 71/115 (61.74%), Postives = 95/115 (82.61%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQ----IEVDKETLDMLEALGM 417 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKRIQKGPVRGIS KLQEEERER+ +VP+ SA+ + + VD +T D++++LG+ Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17A_YEAST (40S ribosomal protein S17-A OS=Saccharomyces cerevisiae GN=RPS17A PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35 Identity = 71/115 (61.74%), Postives = 95/115 (82.61%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQ----IEVDKETLDMLEALGM 417 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKRIQKGPVRGIS KLQEEERER+ +VP+ SA+ + + VD +T D++++LG+ Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17_DICDI (40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.059e-34 Identity = 72/122 (59.02%), Postives = 99/122 (81.15%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEA-LGMNEIPGLVRVD 447 MGRVRTKT+K++S+ +IE++Y R+T DF TNK+ +++A IPSKRLRNKIAGF THLM+RI GPVRGIS KLQEEERE+R ++VP ESAIKT+++++D++ +ML++ L IP + VD Sbjct: 1 MGRVRTKTIKRASKLLIEKHYPRLTNDFDTNKRTCDKLAKIPSKRLRNKIAGFCTHLMRRIANGPVRGISYKLQEEEREKRDNYVPQESAIKTNEVKIDRDVEEMLKSTLEFPTIPQIHVVD 122
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17_ENCCU (40S ribosomal protein S17 OS=Encephalitozoon cuniculi GN=RPS17 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20 Identity = 45/110 (40.91%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALG 414 MG VR K VK+++R + E+Y+ R+ F N ++++VA++ SK+L+N+IAG+ T L K+I KG + +K EEERER+ + +P ES + D +EVD T++M++ G Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIKRYG 110
BLAST of FC920968 vs. ExPASy Swiss-Prot
Match: RS17E_METJA (30S ribosomal protein S17e OS=Methanocaldococcus jannaschii GN=rps17e PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 31/62 (50.00%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 85 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQ 270 MGR+R +K+++ ++I++Y T DF TNK++LEEVA I +KRLRN+IAG+ TH M+++Q Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62 The following BLAST results are available for this feature:
BLAST of FC920968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920968 ID=FC920968; Name=FC920968; organism=Citrus clementina; type=EST; length=691bpback to top |