FC920978
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_CHICK (60S ribosomal protein L39 OS=Gallus gallus GN=RPL39 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 190 M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG Sbjct: 1 MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_CANAL (60S ribosomal protein L39 OS=Candida albicans GN=RPL39 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17 Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 190 MPS K+F K+KLAK +QNRP+P WIR+RTDN IRYNAKRRHWRRTKLG Sbjct: 1 MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRTDNKIRYNAKRRHWRRTKLG 50
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_BOVIN (60S ribosomal protein L39 OS=Bos taurus GN=RPL39 PE=3 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 190 M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: R39L5_HUMAN (Putative 60S ribosomal protein L39-like 5 OS=Homo sapiens GN=RPL39P5 PE=5 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17 Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 190 M SHKTF IK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHW+RTKLG Sbjct: 1 MSSHKTFKIKQFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKLG 50
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_DROME (60S ribosomal protein L39 OS=Drosophila melanogaster GN=RpL39 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17 Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 187 M +HK+F IK+KLAKK++QNR +P W+R+RT NTIRYNAKRRHWRRTKL Sbjct: 1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKL 49
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_SCHPO (60S ribosomal protein L39 OS=Schizosaccharomyces pombe GN=rpl39 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 9.144e-17 Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 187 MPSHK+F K+KLAK RQNRPIP WIR+RT NT+ YN KRRHWRRTKL Sbjct: 1 MPSHKSFRTKQKLAKAARQNRPIPQWIRLRTGNTVHYNMKRRHWRRTKL 49
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_DEBHA (60S ribosomal protein L39 OS=Debaryomyces hansenii GN=RPL39 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.475e-16 Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 187 MPS K+F K+KLAK +QNRP+P WIR+R+ NTIRYNAKRRHWRRTKL Sbjct: 1 MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRSGNTIRYNAKRRHWRRTKL 49
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39L_HUMAN (60S ribosomal protein L39-like OS=Homo sapiens GN=RPL39L PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.011e-15 Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 190 M SHKTF IK+ LAKK +QNRPIP WI+M+ + IRYN+KRRHWRRTKLG Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLG 50
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_ASHGO (60S ribosomal protein L39 OS=Ashbya gossypii GN=RPL39 PE=3 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 2.252e-15 Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLG 190 M + K+F IK+KLAK QNRP+P W R++T+NTIRYNAKRRHWRRTK+G Sbjct: 1 MAAKKSFKIKQKLAKAKNQNRPLPQWFRLKTNNTIRYNAKRRHWRRTKMG 50
BLAST of FC920978 vs. ExPASy Swiss-Prot
Match: RL39_KLUMA (60S ribosomal protein L39 OS=Kluyveromyces marxianus GN=RPL39 PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.842e-15 Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 2 Query: 41 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKL 187 M + K+F+IK+KLAK QNRP+P W R++T+NTIRYNAKRRHWRRTKL Sbjct: 1 MAAKKSFIIKQKLAKAKNQNRPLPQWFRLKTNNTIRYNAKRRHWRRTKL 49 The following BLAST results are available for this feature:
BLAST of FC920978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920978 ID=FC920978; Name=FC920978; organism=Citrus clementina; type=EST; length=413bpback to top |