FC920982

Overview
NameFC920982
Unique NameFC920982
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METM7 (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=gcp PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 66/202 (32.67%), Postives = 106/202 (52.48%), Query Frame = 1
Query:  145 NSEDGSLI-------LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH-SPCGNVMDRILSAYR 726
            NSE+G++        LI +GAEA + +  ++    + KER  K YR   LD  I ++R   EAR +   + LG+  P ++ +D     +   Y+ G   K+          +EE   D    +G  I K+H GG++H DLTTSN ++    +   +IDFGL   S L EDKA+DL VL+++++S+H      V ++I+  Y+
Sbjct:  336 NSENGNIKSRIIPEHLIGKGAEADISKGRYLEFESITKERVKKGYRTSELDELIRMRRTVKEARFLAAIKELGIYAPSIFDIDKENKKIAMSYIHGKIAKE---------KIEEGSIDFCEDLGKIIGKMHVGGIVHNDLTTSNFIV---SDNTFVIDFGLGKYSDLVEDKAIDLIVLKKSIMSIHYDKFDRVWNKIVEGYK 525          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METM6 (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=gcp PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 64/187 (34.22%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  169 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH-SPCGNVMDRILSAYR 726
            LI +GAEA + +  ++    + KER  K YR   LD  I ++R   EAR +T  + LG+  P ++ +D  +  +T  Y+ G   K+          +EE   D    +G  I K+H GG++H DLTTSN ++    +   +IDFGL   S L EDKA+DL VL+++++S+H      V ++I+  Y+
Sbjct:  347 LIGKGAEADISKGRYLEFESITKERVKKGYRILELDELIRMRRTVKEARFLTAIKELGIYAPSIFDIDKERKKITMSYIHGKIAKE---------KIEEGNLDFCEDLGKIIGKMHVGGIVHNDLTTSNFIV---SDNTFVIDFGLGKYSDLVEDKAIDLIVLKKSIMSIHYDKFDLVWNKIVEGYK 521          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METM5 (Putative O-sialoglycoprotein endopeptidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=gcp PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 63/187 (33.69%), Postives = 101/187 (54.01%), Query Frame = 1
Query:  169 LIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH-SPCGNVMDRILSAYR 726
            LI +GAEA + +  ++    + KER  K YR   LD  I L+R   EAR +   + LG+  P ++ +D     +T  Y+ G   K+          +EE   +    +G  I K+H GG++H DLTTSN ++    +   +IDFGL   S L EDKA+DL VL+++++S+H     +V ++I+  Y+
Sbjct:  349 LIGKGAEADISKGIYLEFESITKERVKKGYRILELDELIRLRRTVKEARFLASIKELGIYAPSIFDIDKENKKITMSYIHGKIAKE---------KIEEGNLNFCEDLGKIIGKMHSGGIVHNDLTTSNFIV---SDNTFVIDFGLGKYSDLVEDKAIDLIVLKKSIMSIHYDKFDSVWNKIIEGYK 523          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METMA (Putative O-sialoglycoprotein endopeptidase OS=Methanosarcina mazei GN=gcp PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.638e-23
Identity = 63/172 (36.63%), Postives = 99/172 (57.56%), Query Frame = 1
Query:  169 LIKQGAEARVF-ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 681
            ++  GAEA V+ +    G+R +VKER  K YRH  +D +I  +R   EAR M++ARR GV TP++Y V+  +  L  +++EG  +K +                ++ ++G  + KLH  G++HGDLTTSN+L+     +L LIDFGL++     E + VD++VL +   S H
Sbjct:  354 ILDNGAEAVVYLQEGPEGKRALVKERVPKAYRHKEIDERIRRERNRTEARLMSEARRAGVPTPIIYDVE--EFKLKMQFIEGVPIKYLI------------TPPLSEKVGELVGKLHSSGIVHGDLTTSNLLLAG--ERLYLIDFGLAYFDKSLEARGVDVHVLFQTFESTH 509          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METBF (Putative O-sialoglycoprotein endopeptidase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gcp PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.139e-23
Identity = 64/189 (33.86%), Postives = 108/189 (57.14%), Query Frame = 1
Query:  169 LIKQGAEARVF-ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSPCGNVMDRILSAYRKS 732
            L+  GAEA V+ E    G++ +VKER  K YR+  +D +I  +R   EAR M+++RR GVSTP++Y V+  +  L  +Y++G  +K +               +++ ++G  + KLH  G++HGDLTTSN+L+     +L L+DFGL++     E + VD++VL +   S H     +++     YR++
Sbjct:  352 LLDNGAEAIVYLEEGPEGKKILVKERVPKAYRYKEIDERIRTERNRTEARLMSESRRHGVSTPIIYDVEDFK--LKMQYIDGVPIKYLV------------TPELSEKVGELVGKLHSAGIVHGDLTTSNILLAG--ERLYLLDFGLAYYDKGLEARGVDVHVLFQTFESTHRNHEALIEAFKKGYRRT 524          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METMJ (Putative O-sialoglycoprotein endopeptidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=gcp PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.649e-23
Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 1
Query:  130 MEITANSEDGSLILI--KQGAEARVFESTF-VGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLS 675
            +E+   +E G +  I   +G  AR  E+   +G   V+K R  K+YR+P+LD ++  +R  AEAR +  ARR GV TPV+   D    T+  E ++G  +K +              E I L  G A+ +LH  G++HGDLTTSNM++R G  Q VLIDFGL+ TS+  E + VDL+V  + L S
Sbjct:  319 VEVAWRTEPGEVFSIGPHEGGVARGAEAVVEIGEGNVIKRRTGKRYRYPALDRRLIAERTRAEARLIATARRAGVPTPVIR--DITADTIVMERIKGEVLKYVTAP-----------ETIRL-AGEAVGRLHGTGIVHGDLTTSNMIVRDG--QCVLIDFGLASTSSEVESRGVDLHVFFQTLES 487          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_THEAC (Putative O-sialoglycoprotein endopeptidase OS=Thermoplasma acidophilum GN=gcp PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.766e-23
Identity = 61/189 (32.28%), Postives = 103/189 (54.50%), Query Frame = 1
Query:  175 KQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSPCGNVMDRILSAYRKSSSM 741
            K GAE+R+ E +F GR  + K R SK YR+  LD KI  +R+  E   + K +  GV++PV+Y  DP   ++T + + G           +   + E   D   ++G  IAK+H  G+ HGDLT +N+++    + + +ID  +   +   ED AVD+Y LE ++  L    G+V+ ++L +YR + ++
Sbjct:  335 KAGAESRIEEVSFHGRPAIRKVRISKSYRNSDLDKKIRYERMRNEFTILRKLKEAGVNSPVVYDFDPFSMSITMQKIPGRM---------MSAELNEGRTDFLNELGIMIAKMHRAGIAHGDLTVNNIIV---NDSVFIIDPSMGKVNAEIEDMAVDIYALEDSIKGLGLDSGSVIGQMLKSYRNNFNL 511          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_NATPD (Putative O-sialoglycoprotein endopeptidase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gcp PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.129e-23
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  175 KQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 669
            +QGAEA V      GR  V K R  K YRHP LDS++  +R  +EAR  ++ARR GV TPV+Y VDP    L F+YV    +K    E  +              +G  +A  H  G +HGD T  N  +R G+++  LIDFGL + +   ED A+DL+V E AL
Sbjct:  345 RQGAEAVVDIDADGGR--VTKRRLEKAYRHPVLDSRLRSQRTRSEARLTSEARRQGVPTPVVYDVDPDAGRLVFQYVGDADLKTALSESAVR------------DVGRHLAACHAAGFVHGDPTPRN--VRVGEDRAFLIDFGLGYYTDAVEDYAMDLHVFEGAL 493          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: BUD32_KLULA (Serine/threonine-protein kinase BUD32 OS=Kluyveromyces lactis GN=BUD32 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.062e-22
Identity = 75/196 (38.27%), Postives = 100/196 (51.02%), Query Frame = 1
Query:  172 IKQGAEARVFESTFV-----------GRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRL-GVSTPVLYAVDPVQHTLTFEYV-------EGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNM-LIRSGKN-QLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSPCGN 696
            I QGAEA VF S               +  ++K R  KKYRHP +D  +T  R   E+R + K R + G++ P L   DP    +  E++        G S    FL         + + D  + +G  I  +H     HGDLTTSN+ L+R+G++ Q  LIDFGL   STL EDK VDLYVLERA++S HS   N
Sbjct:   22 ISQGAEAVVFTSPVHPYLPKNRTDGDDKLYILKYRPEKKYRHPVIDKTLTKHRTLGESRLLAKLRLIDGLNVPKLIGCDPYHGCIWLEFLGEDLPNGHGFSNLKNFLWMNASDPYSDLVRDTMINVGKQIGLMHWNDYCHGDLTTSNIVLVRAGEDWQPYLIDFGLGSISTLVEDKGVDLYVLERAIISTHSSFAN 217          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METAC (Putative O-sialoglycoprotein endopeptidase OS=Methanosarcina acetivorans GN=gcp PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.269e-22
Identity = 58/171 (33.92%), Postives = 99/171 (57.89%), Query Frame = 1
Query:  172 IKQGAEARVF-ESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 681
            +  GAEA ++ +    G++ +VKER  K YRH  +D +I  +R   EAR +++ARR GV TP++Y ++  +  L  +++EG  +K +               +++ ++G  + +LH  G++HGDLTTSN+L+     +L LIDFGL++     E + VD++VL +   S H
Sbjct:  355 LDNGAEAVIYLDEGPEGKKVLVKERVPKLYRHKEIDERIRRERNRTEARLISEARRAGVPTPIIYDIE--EFKLKMQFIEGVPIKYLI------------TPELSEKVGELVGRLHSSGIVHGDLTTSNLLLAG--ERLYLIDFGLAYFDKSLEARGVDVHVLFQTFESTH 509          
The following BLAST results are available for this feature:
BLAST of FC920982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GCP_METM79.602e-2432.67Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METM69.602e-2434.22Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METM59.602e-2433.69Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METMA1.638e-2336.63Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METBF2.139e-2333.86Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_METMJ3.649e-2338.92Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
GCP_THEAC4.766e-2332.28Putative O-sialoglycoprotein endopeptidase OS=Ther... [more]
GCP_NATPD8.129e-2340.61Putative O-sialoglycoprotein endopeptidase OS=Natr... [more]
BUD32_KLULA1.062e-2238.27Serine/threonine-protein kinase BUD32 OS=Kluyverom... [more]
GCP_METAC5.269e-2233.92Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionC32201F06EF RVDevelopN Citrus clementina cDNA clone C32201F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920982 ID=FC920982; Name=FC920982; organism=Citrus clementina; type=EST; length=742bp
GATTTTGCGAGTGAGCGCGCTGAGTTCTGTGGCGGCCTGTGGTTTCAGTT
CTGTAGCGGAGCCTCCAGTTTCACCGTATTCTCCACTCATAGCCAATTAC
AGCGGTAAAGTACTGCCAAGTTGTTCAATATGGAGATTACAGCCAACAGT
GAAGATGGATCGCTCATTCTCATAAAGCAAGGAGCTGAAGCTAGGGTTTT
TGAGTCAACTTTTGTGGGAAGGAGGTGTGTTGTCAAGGAGCGTTTCTCAA
AGAAATATAGGCATCCATCTCTGGATTCAAAAATCACTCTCAAACGCCTG
AATGCGGAGGCTAGGTGCATGACCAAAGCTAGAAGACTTGGAGTTTCAAC
TCCGGTGCTTTATGCTGTTGATCCTGTTCAGCATACACTGACATTTGAGT
ATGTCGAGGGTCCTTCTGTCAAAGATATATTCCTTGAATTTGGTTTGCAT
GGTATCATGGAAGAGCAGTTGGAGGATATTGCATTGCAGATTGGTAATGC
AATTGCTAAATTACATGATGGGGGTCTCATTCATGGCGATTTGACCACAT
CAAACATGTTAATTAGGAGTGGCAAAAACCAGCTGGTCCTCATTGACTTT
GGTTTGAGTTTCACATCAACCCTTCCAGAAGACAAAGCTGTTGACTTATA
TGTACTTGAGAGAGCCTTACTTTCGTTGCATTCTCCATGTGGTAATGTGA
TGGACCGGATACTTTCTGCATACAGGAAGTCATCAAGCATGG
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