FC920996

Overview
NameFC920996
Unique NameFC920996
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 57/136 (41.91%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 523
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G KF DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +  +EK+
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPTGTGRGG-NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 60/146 (41.10%), Postives = 79/146 (54.11%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 553
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG G+LSMAN+GP TN SQFF+      +LD KH +FG+VV G D + A+E V  S  +T++P
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENV-ESDPKTDRP 422          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20
Identity = 61/146 (41.78%), Postives = 80/146 (54.79%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 553
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG GILSMAN+GP +N SQFF+      +LD KH +FG+VV G DV+ A+E V  S  +T++P
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENV-ESDPKTDRP 422          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEK 520
            G I +ELF +  PRTAENF ALC        SG+   Y G+ FHR I GFM Q            +SI+G  F+DE     +    G+++MANAGP TN SQFF+  AK   LDGK+ +FG+V++GM+ + ++EK
Sbjct:   10 GDIKIELFCESVPRTAENFLALCA-------SGQ---YDGTLFHRNIRGFMIQGGDPTGTGKGG-QSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSMEK 133          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 56/136 (41.18%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 523
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+  KF DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VFG+V++G++ +  +EK+
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 65/166 (39.16%), Postives = 81/166 (48.80%), Query Frame = 2
Query:   50 PINQSKMPNPKAFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK---KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 538
            P    +    KA+  +T    P     +EL  D  P+T  NF  L        K+GK   Y    FHR+IPGFM Q            ES +G  F DE+  K   KH   G+LSMAN+GP TNGSQFF     T  LDGKH VFG++V G + +  IE+V    G
Sbjct:  303 PTKDKERQKSKAYATITTNFGPLN---VELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIERVNVRPG 454          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 64/161 (39.75%), Postives = 80/161 (49.69%), Query Frame = 2
Query:   44 FSPINQSKMPNPKAFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 523
            F  I   K P  K +          G + +EL  D+ PR  ENF  LC  E+G        +Y G +FHR I  FM Q            ESI+G  F DE N    H+G G++SMAN+GP TNGSQFFV       L+ KH VFG VV G+  + A+E V
Sbjct:  331 FELIKVEKNPKKKGYVQFQT---THGDLNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENV 477          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 63/152 (41.45%), Postives = 80/152 (52.63%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX----ESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVGSSSGRTNKP 553
            G I +E++ +  P+TAENF ALC    G G      +Y  S FHRVIP FM Q                 SI+G  F DE     +H   G+LSMAN GPGTNGSQFF+   K   LDG + VFG+V+  EG+  +  +E V     R N+P
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSG------YYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAV--EVDRKNRP 149          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIB_STRCH (Peptidyl-prolyl cis-trans isomerase B OS=Streptomyces chrysomallus GN=cypB PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 62/154 (40.26%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKG-----IGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKK-HTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV--VEGMDVVKAIEKVGSSSGRTNKPV 556
            G I + L  +  P+T  NF  L TG++       G+      Y G+ FHRVI GFM Q                G KFADE   +   T P +L+MANAGPGTNGSQFF+  + T WL GKH +FG+V    G  VV AI     ++ RT++P+
Sbjct:   14 GDIEIRLLPNHAPKTVRNFVELATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGDPLGNGTGGP----GYKFADEFHPELGFTQPYLLAMANAGPGTNGSQFFLTVSPTAWLTGKHTIFGEVSGEAGRKVVDAIAAT-PTNPRTDRPL 162          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 65/157 (41.40%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGK---SGKPL--HYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVGS-SSGRTNKPVVI 562
            G I + LF +  P+T  NF  L  G K       SG P    Y G+ FHRVI GFM Q                G KFADE   + +   P +L+MANAGPGTNGSQFF+   KT  L+ +H +FG+V+  E   VV+AI K  +  + R   PVVI
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVI 176          
The following BLAST results are available for this feature:
BLAST of FC920996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL3_HUMAN1.989e-2041.91Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL2_MOUSE1.989e-2041.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN2.598e-2041.78Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL3_CRYNE5.787e-2043.70Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL3_MOUSE9.871e-2041.18Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL2_CRYNE3.751e-1939.16Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL2_ARATH3.751e-1939.75Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIL3_GIBZE1.425e-1841.45Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIB_STRCH2.431e-1840.26Peptidyl-prolyl cis-trans isomerase B OS=Streptomy... [more]
PPIA_MYCTU2.431e-1841.40Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]

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Properties
Property NameValue
Genbank descriptionC32201G09EF RVDevelopN Citrus clementina cDNA clone C32201G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920996 ID=FC920996; Name=FC920996; organism=Citrus clementina; type=EST; length=698bp
GCCAACAATCACCAAATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTC
CAATCAACCAATCAAAAATGCCAAACCCCAAAGCGTTCTTCGACATGACC
GTCGGCGGTCAGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGT
CACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAG
GCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCAC
CGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAA
CGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACT
TCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGA
CCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTG
GCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACG
TCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAG
CCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
ATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTAT
GTTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTATCTTTATCT
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