FC920996

Overview
NameFC920996
Unique NameFC920996
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 59/153 (38.56%), Postives = 78/153 (50.98%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK-PVVIAD 568
            G I +EL  D  P    NF  L           K  +Y+ + FHR I  FM Q            +SI+G  F DE F    KH   GI+SMAN G  TNGSQFF+     + LD KH +FG+VV G++V+ A+EKV ++S    K P+ + D
Sbjct:  285 GEINIELHTDYAPHAVYNFVQLA----------KQGYYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDE-FCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLED 425          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 57/136 (41.91%), Postives = 70/136 (51.47%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 523
            G I +ELF+D  P+T  NF  L        K+G   +Y    FHR I  FM Q            ESI+   F DE     KH   G+LSMAN G  TNGSQFF+  A    LDG H VFG+VV G+DV+  +E +
Sbjct:  295 GNINVELFSDKKPKTCHNFIELA-------KTG---YYNDVIFHRNIKKFMIQGGDPTGTGKGG-ESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVGGLDVLSKLESI 419          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 62/157 (39.49%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGK---SGKPL--HYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVGS-SSGRTNKPVVI 562
            G I + LF +  P+T  NF  L  G K       SG P    Y G+ FHRVI GFM Q                G KFADE   + +   P +L+MANAGPGTNGSQFF+   +T  L+ +H +FG+V   +   VV AI    +  + R  +PVVI
Sbjct:   24 GDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTDPDSQKVVDAISTTATDGNDRPTEPVVI 176          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 63/174 (36.21%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVC----------------------------TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 556
            G +  +L  DV P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE   +     G LSMANAGP TNGSQFF+                             T  T WLD KH VFGQ++EG D ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLLPDVAPKTVENFVTHA-------KNG---YYNGVTFHRVINDFMVQGGDPTATGMGG-ESIYGEPFEDEFSKEAFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLIEGKDTLEDI--ANTKVGPQDKPL 185          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 58/153 (37.91%), Postives = 77/153 (50.33%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALC-TGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVIAD 568
            G + +EL+ +  P+   NF  L  TG           +YKG +FHR IP FM Q            +S++G  F DE +    H G G LSMAN G  TN SQFF     T  LD KH VFG+VVE ++V+  +E V +  S R    ++I D
Sbjct:  332 GDLTIELYPEFAPKAVWNFIKLSQTG-----------YYKGVAFHRNIPNFMIQGGDPSGSGRGG-QSVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVVENINVLSKMENVPTDGSNRPLNKILIKD 472          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 66/178 (37.08%), Postives = 86/178 (48.31%), Query Frame = 2
Query:   38 VFFSPINQSKMPNPKAFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE---NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMD--VVKAIEKVGSSSGRTNKPV 556
            V FS I     P+ KA+  ++      G + +EL     P+T  NF  LC       K GK   Y  + FHR IPGFM Q             SI+ S F DE       KH   G+LSMAN G  TN SQFF+       LDGKH VFG++V+G     +  +E+V S  G T++P+
Sbjct:  280 VMFSHIKSR--PSSKAYVRLSTN---FGALNLELHCGKAPKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQG-TDRPL 440          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 556
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 556
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 556
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 59/174 (33.91%), Postives = 78/174 (44.83%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 556
            G +  +LF ++ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  +      G LSMAN+GP TNGSQFF+   K                            T WLD KH VFGQ+++G   ++ I    +  G  +KP+
Sbjct:   25 GDMTFKLFPNIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDI--ANTKVGPQDKPL 185          
The following BLAST results are available for this feature:
BLAST of FC920996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIL2_SCHPO1.334e-1638.56Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL2_RHIOR1.742e-1641.91Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]
PPIA_MYCLE1.742e-1639.49Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPI1_STAS12.276e-1636.21Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL2_GIBZE6.621e-1637.91Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
PPIL2_USTMA2.516e-1537.08Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPI1_STAAW2.516e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS2.516e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR2.516e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN2.516e-1533.91Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionC32201G09EF RVDevelopN Citrus clementina cDNA clone C32201G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920996 ID=FC920996; Name=FC920996; organism=Citrus clementina; type=EST; length=698bp
GCCAACAATCACCAAATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTC
CAATCAACCAATCAAAAATGCCAAACCCCAAAGCGTTCTTCGACATGACC
GTCGGCGGTCAGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGT
CACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAG
GCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCAC
CGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAA
CGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACT
TCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGA
CCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTG
GCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACG
TCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAG
CCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
ATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTAT
GTTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTATCTTTATCT
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