FC920997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_CAEEL (60S ribosomal protein L38 OS=Caenorhabditis elegans GN=rpl-38 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 8.458e-21 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 263 MPK+I EIKDFL+ ARRKDA+SVKIK++ + KFKVRC+ YLYTL V D +KA+KLKQSLPPG+ V++L Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQVKEL 69
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_LONON (60S ribosomal protein L38 OS=Lonomia obliqua GN=RpL38 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 46/69 (66.67%), Postives = 61/69 (88.41%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 263 MP++I +IKDFLL ARRKDA+SV+IK++ + VKFKVRCS++LYTL + D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVEIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 69
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_ANOGA (60S ribosomal protein L38 OS=Anopheles gambiae GN=RpL38 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.105e-20 Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 263 MP++I E+KDFL+ ARRKDAR+VKIK++ KFK+RCS+YLYTL V D EKA+KLKQSLPPGL V+++ Sbjct: 1 MPQEIKEVKDFLIKARRKDARAVKIKKNETNTKFKIRCSRYLYTLVVKDMEKAEKLKQSLPPGLQVKEV 69
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_OSTOS (60S ribosomal protein L38 OS=Ostertagia ostertagi GN=rpl-38 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.351e-20 Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 263 MPKQI EIKDFL+ ARRKDA+ VKIK++ VKFKVRCS+YL+TL V D +KA+KLKQSLPPG+ V +L Sbjct: 1 MPKQITEIKDFLVLARRKDAKIVKIKKNSLNVKFKVRCSRYLFTLVVNDKDKAEKLKQSLPPGIQVIEL 69
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_DROYA (60S ribosomal protein L38 OS=Drosophila yakuba GN=RpL38 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.721e-19 Identity = 44/69 (63.77%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 263 MP++I E+KDFL ARR DAR+VKIK++ KFK+RCS++LYTL V D EKADK+KQSLPPGL V+++ Sbjct: 1 MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQVKEV 69
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_DROME (60S ribosomal protein L38 OS=Drosophila melanogaster GN=RpL38 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.721e-19 Identity = 44/69 (63.77%), Postives = 57/69 (82.61%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL 263 MP++I E+KDFL ARR DAR+VKIK++ KFK+RCS++LYTL V D EKADK+KQSLPPGL V+++ Sbjct: 1 MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQVKEV 69
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38A_SCHPO (60S ribosomal protein L38-1 OS=Schizosaccharomyces pombe GN=rpl38a PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.264e-16 Identity = 43/74 (58.11%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDV-VKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL*RRS 275 MP+QI +IK FL ARRKDA S +IK++ + VKFK+RCSKYLYTL V D++KA+KL+QSLPP L+V ++ +++ Sbjct: 1 MPRQISDIKQFLEIARRKDATSARIKKNTNKDVKFKLRCSKYLYTLVVADAKKAEKLRQSLPPDLTVTEVGKKA 74
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_NEUCR (60S ribosomal protein L38 OS=Neurospora crassa GN=rpl-38 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.113e-15 Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRDV--VKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL*RRS 275 MP++I +IK F+ RRKDA + +IK+++ +KFKVRC KYLYTL + DS+KA+KLK SLPP L++ D+ +R+ Sbjct: 1 MPQEIGDIKKFIEICRRKDASAARIKKNKATQQIKFKVRCQKYLYTLVLKDSDKAEKLKASLPPSLTIADVAKRN 75
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38_DICDI (60S ribosomal protein L38 OS=Dictyostelium discoideum GN=rpl38 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.057e-15 Identity = 37/65 (56.92%), Postives = 51/65 (78.46%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKR-SRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGL 248 MP++I EIKDFL+T R KDA+ ++IK+ +++ KFKVRC +YLYTL V D+ KA KL Q+LPP + Sbjct: 1 MPREIREIKDFLVTVRNKDAKEIRIKKVGKNLTKFKVRCGRYLYTLRVADNAKAAKLMQTLPPSI 65
BLAST of FC920997 vs. ExPASy Swiss-Prot
Match: RL38B_SCHPO (60S ribosomal protein L38-2 OS=Schizosaccharomyces pombe GN=rpl38b PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.057e-15 Identity = 38/74 (51.35%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 57 MPKQIHEIKDFLLTARRKDARSVKIKRSRD-VVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL*RRS 275 MP+Q+ +IK FL A R DA S ++K++++ VKFK+RCS+YLYTL V D++KA+KL+QSLPP L+V ++ +++ Sbjct: 1 MPRQVTDIKLFLQLAHRGDATSARVKKNQNKAVKFKLRCSRYLYTLVVADAKKAEKLRQSLPPALTVTEVGKKA 74 The following BLAST results are available for this feature:
BLAST of FC920997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920997 ID=FC920997; Name=FC920997; organism=Citrus clementina; type=EST; length=525bpback to top |