FC921074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_ORITI (30S ribosomal protein S14 OS=Orientia tsutsugamushi (strain Ikeda) GN=rpsN PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 182 KRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 KR L K +LKR+ KS D NL E R + KL++LPRNSS TR+RNRC TGR R Y KF++ R + R LA G++ G++K+SW Sbjct: 12 KRSKLFNKLKLKRQALKSKIYDKNLSLEERFNLVLKLSKLPRNSSSTRIRNRCAETGRPRGYYRKFKLCRNIIRELAGSGIIPGLRKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_ORITB (30S ribosomal protein S14 OS=Orientia tsutsugamushi (strain Boryong) GN=rpsN PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.687e-17 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 182 KRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 KR L K +LKR+ KS D NL E R + KL++LPRNSS TR+RNRC TGR R Y KF++ R + R LA G++ G++K+SW Sbjct: 12 KRSRLFNKLKLKRQALKSKIYDKNLSLEERFNLVLKLSKLPRNSSSTRIRNRCAETGRPRGYYRKFKLCRNIIRELAGSGIIPGLRKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_PARL1 (30S ribosomal protein S14 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpsN PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 176 DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 D KRR L K+ KR K+ D L E R + KLA LPRNSS TR+ NRC TGRS+A Y K RMSRI R LA++G + G+ K+SW Sbjct: 10 DLKRRKLTAKYAAKRAKLKAATMDEALSMEDRFQAQLKLAELPRNSSKTRIHNRCEITGRSKAYYRKLRMSRIALRDLASRGQIPGMVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RR14_HELSJ (Plastid 30S ribosomal protein S14 OS=Helicosporidium sp. subsp. Simulium jonesii GN=rps14 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 170 IEDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 + ++K+ +L K+ KR L KS + T+ K L KL +LP+ SS T+LRNRC TGR+R VY ++++SR VFR+LA G+L GV KASW Sbjct: 8 VREYKKNILVNKYYKKRLLLKSQLNNTINSTDCILKILNKLQKLPKKSSPTKLRNRCTLTGRARGVYSEYKISRFVFRNLALNGLLPGVFKASW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHIME (30S ribosomal protein S14 OS=Rhizobium meliloti GN=rpsN PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.161e-16 Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 173 EDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 ++ +RR L KR + K++ + +LP E R K KLA LPR+ S TR+RNRC TGR RA Y K RMSRI R L N G + GV K+SW Sbjct: 9 KNKRRRKLVANHAAKRAVLKAIIMNQSLPIEERFKATLKLAELPRDGSKTRIRNRCEVTGRPRAYYRKLRMSRIALRELGNLGKVPGVVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHOP5 (30S ribosomal protein S14 OS=Rhodopseudomonas palustris (strain BisA53) GN=rpsN PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +IE +++R+ +A KR+ K++ D + P E R KLA +PRNSS TR+RNRC TGR+RAVY K ++SRI R L ++G++ G+ K+SW Sbjct: 1 MAKKSSIEKNNRRKKMAKNAAPKRERLKAIIADRSKPMEERFAATLKLAEMPRNSSITRVRNRCELTGRARAVYRKNKLSRIAIRDLGSRGLVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHOPS (30S ribosomal protein S14 OS=Rhodopseudomonas palustris (strain BisB5) GN=rpsN PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRLLATKFEL-KRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +IE + RR TK KR K++ D +LP E R KLA +PRNSS TR+RNRC TGRSR+VY ++SRI R L ++G++ G+ K+SW Sbjct: 1 MAKKSSIEKNNRRRKMTKNAAPKRARLKAIIADKDLPMEERFAATLKLAEMPRNSSATRIRNRCEITGRSRSVYRLNKLSRIAIRDLGSKGLVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_SINMW (30S ribosomal protein S14 OS=Sinorhizobium medicae (strain WSM419) GN=rpsN PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 45/93 (48.39%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 173 EDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 ++ +RR L KR K+ + +LP E R K KLA LPR+ S TR+RNRC TGR RA Y K RMSRI R L N G + GV K+SW Sbjct: 9 KNKRRRKLVANHSAKRAALKATIMNQSLPIEERFKATLKLAELPRDGSKTRIRNRCEVTGRPRAYYRKLRMSRIALRELGNLGKVPGVVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_SILST (30S ribosomal protein S14 OS=Silicibacter sp. (strain TM1040) GN=rpsN PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K IE + KR L K+ KR K + D + P E R K KLA+LPRNSS TRL NRC TGR A Y K ++SRI R L + G + G+ K+SW Sbjct: 1 MAKKAMIEREKKRERLVAKYAAKRAELKEIANDESRPMEERFKARLKLAKLPRNSSATRLHNRCQLTGRPHAYYRKLKVSRIALRELGSNGQIPGMVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_PARUW (30S ribosomal protein S14 OS=Protochlamydia amoebophila (strain UWE25) GN=rpsN PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 44/102 (43.14%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 152 VSEKRNIEDHKRR--LLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K ++E KRR L+ K++ +++L + Y ++NL E RE+ L ++PR+SS RLRNRC TGR+R KF++SR+ FR LA+ GM+ GV K+SW Sbjct: 1 MAKKSSVEKQKRRERLVQLKWDKRKELREKSY-NINLSEEEREQARIALNKMPRDSSPIRLRNRCQMTGRARGFMRKFKLSRLTFRELASMGMIPGVTKSSW 101 The following BLAST results are available for this feature:
BLAST of FC921074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921074 ID=FC921074; Name=FC921074; organism=Citrus clementina; type=EST; length=681bpback to top |