FC921074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_METS4 (30S ribosomal protein S14 OS=Methylobacterium sp. (strain 4-46) GN=rpsN PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRL-LATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K IE +K+R+ L ++ KR+ S D +LP E R + KLA LPRN++ TR+RNRC TGR RA Y K +SR+ R L ++GM+ G+ K+SW Sbjct: 1 MAKKSKIERNKQRVALVKRYAAKREALLSTANDESLPMEDRFEARLKLAELPRNANPTRIRNRCAMTGRPRAYYRKLGISRVALRDLGSRGMIPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_CAUCR (30S ribosomal protein S14 OS=Caulobacter crescentus GN=rpsN PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 188 RLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 + L KF KR K++ D LP E R + KLA+LPRNS+ R+RNRC TGR RA Y K +MSR+ R L +QG + G+ K+SW Sbjct: 14 KALVKKFAEKRAALKAIANDETLPLEERFEARLKLAKLPRNSAAIRIRNRCEVTGRPRAYYRKLKMSRVALRELGSQGQIPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_PARDP (30S ribosomal protein S14 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpsN PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16 Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +E + KR L K+ KR + D +LP E R K KLA LPRNSS TRL NRC TGR A Y K ++SRI+ R L + G + G+ K+SW Sbjct: 1 MAKKSMVEREKKRERLVQKYAAKRAALNEIIHDQSLPMEERFKASLKLAELPRNSSATRLHNRCQLTGRPHAYYRKLKLSRIMLRELGSFGQIPGMVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_DINSH (30S ribosomal protein S14 OS=Dinoroseobacter shibae (strain DFL 12) GN=rpsN PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16 Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K IE + KR+ L K+ KR K + D + P E R K KLA LPRNSS TRL NRC TGR A Y K ++SRI R L + G + G+ K+SW Sbjct: 1 MAKKAMIEREKKRQKLVAKYAAKRAALKEIANDDSKPMEERFKARLKLAELPRNSSATRLHNRCQLTGRPHAYYRKLKISRIALRDLGSAGQIPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHOP2 (30S ribosomal protein S14 OS=Rhodopseudomonas palustris (strain HaA2) GN=rpsN PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRLLATKFEL-KRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +IE + RR TK KR K++ D +LP E R KLA +PRNSS TR+RNRC TGR+R+VY ++SRI R L ++G++ G+ K+SW Sbjct: 1 MAKKSSIEKNNRRKKMTKNAAPKRARLKAIIADKDLPMEERFAATLKLAEMPRNSSATRIRNRCEITGRARSVYRLNKLSRIAIRDLGSKGLVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHILO (30S ribosomal protein S14 OS=Rhizobium loti GN=rpsN PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.401e-15 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 173 EDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 ++++RR LA ++ KR K++ D + P E R + KLA LPRNS+ R+RNRC TGR RA Y K ++SRI R L N G + G+ K+SW Sbjct: 9 KNNRRRKLADQYGPKRAALKAIIMDQSKPMEERFRAQLKLAALPRNSAKIRIRNRCEVTGRPRAYYRKLKVSRIALRDLGNNGQIPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_HYPNA (30S ribosomal protein S14 OS=Hyphomonas neptunium (strain ATCC 15444) GN=rpsN PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.401e-15 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K IE +++R+ LA ++ KR K+ D NL E R K KLA LPRNS+ R+RNRC TGR RA Y K +MSRI R ++G + G+ K+SW Sbjct: 1 MAKKSAIEKNNRRKALAARYAAKRAQLKAAAMDENLSLEERFKARLKLAELPRNSAPNRVRNRCEITGRPRAFYRKLKMSRIALREYGSRGQVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_SILPO (30S ribosomal protein S14 OS=Silicibacter pomeroyi GN=rpsN PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K IE + KR L ++ KR K + D + P E R K KLA+LPRNSS TRL NRC TGR A Y K ++SRI+ R L + G + G+ K+SW Sbjct: 1 MAKKSMIEREKKRERLVAQYAAKRAELKEIANDESRPMEERFKARLKLAKLPRNSSATRLHNRCQLTGRPHAYYRKLKVSRIMLRELGSAGQIPGMVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHOPB (30S ribosomal protein S14 OS=Rhodopseudomonas palustris (strain BisB18) GN=rpsN PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRLLATKFEL-KRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +IE + RR TK KR K++ D + P E R KL+ +PRNSS TR+RNRC TGR+R+VY K ++SRI R L ++G++ G+ K+SW Sbjct: 1 MAKKSSIEKNNRRKRLTKNAAPKRAKLKAIIADKSKPMEERFAATLKLSEMPRNSSATRIRNRCEITGRARSVYRKNKLSRIAIRDLGSRGLVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_METRJ (30S ribosomal protein S14 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=rpsN PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 152 VSEKRNIEDHK-RRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +S+K ++E ++ R+ L +F KRK + + L E R + KLA LPRNSS TR+RNRC TGR RA Y K +SR+ R L N+G++ G+ K+SW Sbjct: 1 MSKKSSVEKNEARKALVKRFAAKRKALLEIANNDALEMEERFEARLKLAELPRNSSATRIRNRCGMTGRPRAYYRKMGISRVALRELGNRGLIPGLVKSSW 101 The following BLAST results are available for this feature:
BLAST of FC921074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921074 ID=FC921074; Name=FC921074; organism=Citrus clementina; type=EST; length=681bpback to top |