FC921074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_AKKM8 (30S ribosomal protein S14 OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=rpsN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 218 RKLYKSLYRDVNLPTEVR-EKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +K +++ R L +++ EK L LPRN+S TR NRC+ +GR RA +F++SRI FR LAN GM+ GV K+SW Sbjct: 11 KKKAETVKRYAELRAQLKAEKDYIGLTMLPRNASPTRTVNRCLVSGRRRAFIRRFKLSRISFRELANAGMIPGVTKSSW 89
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_ACISJ (30S ribosomal protein S14 OS=Acidovorax sp. (strain JS42) GN=rpsN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 182 KRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 KR LA K+ K K++ D E RE L +LPRN++ TR RNRC TGR R + +F + R R LA G + GV KASW Sbjct: 12 KREKLAAKYAAKYAELKAIAGDAKRSDEEREAARLGLQKLPRNANPTRQRNRCEITGRPRGTFRQFGLGRAKIRELAFAGDIPGVTKASW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RR14_GUITH (30S ribosomal protein S14, chloroplastic OS=Guillardia theta GN=rps14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K IE + KR L +K+E KR KS + E E Y K+ +PRN+ +RLRNRC TGRSR Y F +SR V R + + +L GV K+SW Sbjct: 1 MAKKSMIERERKREELVSKYEKKRLELKSKLKKTAEYEEKLEVYK-KIQEIPRNAFPSRLRNRCWVTGRSRGYYRDFGLSRHVLREMVHDCLLPGVTKSSW 100
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RR14_CUSOB (30S ribosomal protein S14, plastid OS=Cuscuta obtusiflora GN=rps14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 39/92 (42.39%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 176 DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 D KR+ L K+ L R+ K V+L +E RE Y+ KL PRNS+ TRLR RC TGR RA Y F +S + R + +L G ++SW Sbjct: 10 DKKRKKLEQKYHLIRRSSKQEIHKVSLLSEKREFYV-KLQSSPRNSAPTRLRRRCFVTGRPRANYRDFELSGHILREMVEACLLPGAIRSSW 100 The following BLAST results are available for this feature:
BLAST of FC921074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921074 ID=FC921074; Name=FC921074; organism=Citrus clementina; type=EST; length=681bpback to top |