FC921074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_BRUA2 (30S ribosomal protein S14 OS=Brucella abortus (strain 2308) GN=rpsN PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 170 IEDHKRR-LLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +E +KRR L + +KR K++ D LP E R + +LA LPRNS+ R+RNRC +GR R Y K +MSRI R L + G + GV K+SW Sbjct: 7 VEKNKRREKLVKRHAVKRARLKAIVMDQGLPLEERFRATIRLAELPRNSAKVRIRNRCEVSGRPRGYYRKLKMSRIALRQLGSLGQIPGVVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_BRUA1 (30S ribosomal protein S14 OS=Brucella abortus (strain S19) GN=rpsN PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 2 Query: 170 IEDHKRR-LLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +E +KRR L + +KR K++ D LP E R + +LA LPRNS+ R+RNRC +GR R Y K +MSRI R L + G + GV K+SW Sbjct: 7 VEKNKRREKLVKRHAVKRARLKAIVMDQGLPLEERFRATIRLAELPRNSAKVRIRNRCEVSGRPRGYYRKLKMSRIALRQLGSLGQIPGVVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHILW (30S ribosomal protein S14 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 173 EDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 ++ +RR KR K++ + LP E R K KLA LPR+ S TR+RNRC +GR RA Y K RMSRI R L N G + G+ K+SW Sbjct: 9 KNKRRRTTVANQAAKRAALKAIIMNQALPIEERFKASIKLASLPRDGSKTRIRNRCEVSGRPRAYYRKLRMSRIALRELGNLGKVPGIVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHIEC (30S ribosomal protein S14 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 173 EDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 ++ +RR KR K++ + LP E R K KLA LPR+ S TR+RNRC +GR RA Y K RMSRI R L N G + G+ K+SW Sbjct: 9 KNKRRRTTVANQAAKRAALKAIIMNQALPIEERFKASIKLASLPRDGSKTRIRNRCEVSGRPRAYYRKLRMSRIALRELGNLGKVPGIVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_RHIE6 (30S ribosomal protein S14 OS=Rhizobium etli (strain CIAT 652) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 173 EDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 ++ +RR KR K++ + LP E R K KLA LPR+ S TR+RNRC +GR RA Y K RMSRI R L N G + G+ K+SW Sbjct: 9 KNKRRRTTVANQAAKRAALKAIIMNQALPIEERFKASIKLASLPRDGSKTRIRNRCEVSGRPRAYYRKLRMSRIALRELGNLGKVPGIVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_NITHX (30S ribosomal protein S14 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRLLAT-KFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +IE + RR T KR K++ D P E R KLA +PRNSS TR+RNRC TGR R+ Y K ++SRI R L ++G++ G+ K+SW Sbjct: 1 MAKKSSIEKNNRRKRMTGNAAAKRARLKTIIADKTKPMEERFAATLKLAEMPRNSSATRIRNRCELTGRPRSNYRKTKLSRIALRDLGSRGLVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_BRASB (30S ribosomal protein S14 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 41/101 (40.59%), Postives = 64/101 (63.37%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K ++E +++R+ +A KR K++ D P E R KLA +PRNSS TR+RNRC TGR R+ Y K ++SRI R L ++G++ G+ K+SW Sbjct: 1 MAKKSSVEKNNRRKRMAKNAAPKRARLKAIIADKTKPMEERFAATLKLAEMPRNSSATRIRNRCELTGRPRSNYRKNKLSRIALRELGSKGLVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_BARBK (30S ribosomal protein S14 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 170 IEDHKRR-LLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +E +KRR ++A ++ +R K++ D + E R K +LA LPRNS+ R+RNRC TGR RA Y K +MSRI R L + G + GV K+SW Sbjct: 7 VEKNKRREMMAKRYAARRARLKAIVMDQKVSLEERFKASIQLAELPRNSARVRVRNRCEVTGRPRAYYRKLQMSRIALRELGSLGHIPGVVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_ANAPZ (30S ribosomal protein S14 OS=Anaplasma phagocytophilum (strain HZ) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 2 Query: 182 KRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 KR ++ KRK ++ +D +L R KL+++PR+SS+ R+RNRC+ TGR R Y KF+MSRIV R L + G + G+ K+SW Sbjct: 12 KRVAISAALSEKRKALVAIIKDESLSMSERFAAQLKLSKMPRDSSYIRIRNRCLITGRPRGYYRKFKMSRIVLRQLGSIGQIPGLTKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_NITWN (30S ribosomal protein S14 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsN PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 152 VSEKRNIE-DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +IE +++RR + KR K++ D P E R KLA +PRNSS TR+RNRC TGR R+ Y K ++SRI R L ++G++ G+ K+SW Sbjct: 1 MAKKSSIEKNNRRRRMNRNAAAKRARLKAIIGDKTKPMEERFAATLKLAEMPRNSSATRIRNRCELTGRPRSNYRKNKLSRIALRDLGSRGLVPGLVKSSW 101 The following BLAST results are available for this feature:
BLAST of FC921074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921074 ID=FC921074; Name=FC921074; organism=Citrus clementina; type=EST; length=681bpback to top |