FC921074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_THICR (30S ribosomal protein S14 OS=Thiomicrospira crunogena (strain XCL-2) GN=rpsN PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 176 DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 + KR + K+ KR K D++L E R + + KLA+LPRN+S R +NRC TGR VY KF +SR + R LA QG + G++KASW Sbjct: 10 EKKRAKMVAKYSAKRAELKKASVDMSLSFEERMEAMDKLAKLPRNASPVRQQNRCRLTGRPHGVYRKFGLSRNMLRQLAMQGDVPGLRKASW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_NEOSM (30S ribosomal protein S14 OS=Neorickettsia sennetsu (strain Miyayama) GN=rpsN PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 2 Query: 170 IEDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 ++D ++R LA + KR +++ D + + R KL LPRNSS R +NRC TGR R Y KF +SRI R LAN G L GV K+SW Sbjct: 8 VKDERKRALACRSREKRSAVRNMRNDKTISLKERVAIQAKLNSLPRNSSPARSKNRCSITGRPRGYYRKFGISRIQLRVLANWGKLPGVVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_GRABC (30S ribosomal protein S14 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rpsN PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 185 RRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 R +A++ + KR K++ D +LP E R + +LA+LPRN + R+R RC TGR RA Y KF++ R+ R LA+ G + G+ KASW Sbjct: 13 RERMASRDKAKRAALKAIVMDRSLPVEDRFEATLRLAQLPRNGAANRVRLRCELTGRPRANYRKFKLCRVALRDLASSGQIPGLVKASW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_BRAJA (30S ribosomal protein S14 OS=Bradyrhizobium japonicum GN=rpsN PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRLLATKFEL-KRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K +IE + RR K KR+ K++ D LP E R KLA +PRNSS TR+R RC +GR R+ Y K ++SRI R L ++GM+ G+ K+SW Sbjct: 1 MAKKSSIEKNNRRKRMVKNAAPKRERLKAIIADKTLPMEERFAATLKLAEMPRNSSATRVRLRCELSGRPRSNYRKNKLSRIALRELGSKGMVPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_BEII9 (30S ribosomal protein S14 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rpsN PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRL-LATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K ++E +K R L ++ +R K++ D L E R + KLA LPRNS+ RLRNRC +GR RA K +MSRI R L +QG++ G+ K+SW Sbjct: 1 MAKKSSVEKNKHRAQLVKQYAGRRARLKAIANDETLSMEERFEARLKLAELPRNSAPVRLRNRCEISGRPRAFTRKMKMSRIAVRELGSQGLIPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_PROA2 (30S ribosomal protein S14 OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=rpsN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 176 DHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 + KR+ L K+ KR+ K+ D L++LPRNSS TR+RNRC+ TGR R VYEKF + R +FR LA +G + GVKKASW Sbjct: 10 NEKRKALVEKYAAKREELKNA-GDYEA-----------LSKLPRNSSATRVRNRCVLTGRGRGVYEKFGLCRHMFRKLALEGKIPGVKKASW 89
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_OLICO (30S ribosomal protein S14 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=rpsN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRLLATK-FELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K ++E + RR K KR K++ D P E R KLA +PRNSS TR++NRC +GR +VY K +MSRI R ++G++ G+ K+SW Sbjct: 1 MAKKSSVEKNNRRQRMVKNAAAKRARLKAIIADKTKPMEERFAATMKLAEMPRNSSATRIKNRCEISGRPHSVYRKTKMSRIAIRDFGSRGLIPGLVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_ACICJ (30S ribosomal protein S14 OS=Acidiphilium cryptum (strain JF-5) GN=rpsN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 182 KRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +R +A + KR K++ D +LP E R KLA+LPRN + TR+R RC TGR+R Y KF++ R+ R LA+ G + G+ K+SW Sbjct: 12 RREKMAARDAAKRAALKAIVNDRSLPVEDRFDATLKLAQLPRNGAKTRVRLRCELTGRARGNYRKFKLCRVALRDLASAGQIPGMVKSSW 101
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_WOLPM (30S ribosomal protein S14 OS=Wolbachia pipientis wMel GN=rpsN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 152 VSEKRNIEDHKRRL-LATKFELKRKLYKSLYRDVNLPTEVREKYLCKLAR-LPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 +++K IE + RR+ L +++ KR+ KS+ + NL R KL + LPRNSS T++RNRC TGR R VY KF + RIV R L + G + GV K+SW Sbjct: 1 MAKKSMIERNLRRIKLCDQYKEKREKLKSIINNKNLSIVERFTAQNKLIKKLPRNSSKTKIRNRCALTGRPRGVYRKFGLCRIVLRDLCSFGQIPGVTKSSW 102
BLAST of FC921074 vs. ExPASy Swiss-Prot
Match: RS14_SPHAL (30S ribosomal protein S14 OS=Sphingopyxis alaskensis GN=rpsN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 2 Query: 140 KMSTVSEKRNIEDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW 451 K+S+V++ + +R+ L K+ + K++ D +L R K+A +PRN + TR+RNRC TGR RA Y KFR+ R+ R LAN+G++ GV K+SW Sbjct: 3 KLSSVNK-----NERRKKLVKKYAGRYAKLKAIAADSSLDDGERLIARLKMAEIPRNGNPTRIRNRCELTGRPRAYYRKFRLCRVQLRDLANKGLIPGVVKSSW 101 The following BLAST results are available for this feature:
BLAST of FC921074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921074 ID=FC921074; Name=FC921074; organism=Citrus clementina; type=EST; length=681bpback to top |