FC921124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_DINSH (Pseudouridine-5'-phosphate glycosidase OS=Dinoroseobacter shibae (strain DFL 12) GN=psuG PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.264e-45 Identity = 98/177 (55.37%), Postives = 124/177 (70.06%), Query Frame = 2 Query: 137 NLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 + V + +V AL VVALESTII+HGMP+P N E AK VE +R GA+PATIA+L+G+ +GL +ELE LAK+ A K +R DI + ++ + TTV+ATM A M GI VF TGGIGGVH+ E + DIS+DLTELGRT V VV+AG K+ILD+P+TLE LET GV V Sbjct: 6 SFVDVHADVRNALETNAPVVALESTIITHGMPFPDNVEMAKAVEEEIRARGAIPATIAVLDGVLKIGLGADELEALAKV-KDALKISRADIGYAISQGKSAGTTVAATMIVAQMAGIRVFATGGIGGVHKGVETSFDISADLTELGRTDVIVVAAGAKAILDVPKTLEVLETQGVSV 181
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_ROSDO (Pseudouridine-5'-phosphate glycosidase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=psuG PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.157e-45 Identity = 98/172 (56.98%), Postives = 122/172 (70.93%), Query Frame = 2 Query: 152 SPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 S EV+ A + G +VALESTII+HGMPYPQN E A++VE +R G PATIA+++G +GL +LE LA+ A K +R DIA +AT G GATTVSATM A + GI VF TGGIGGVHR E + D+S+DL EL +TPV VV+AG K+ILD+ +TLE LET GV V Sbjct: 9 SAEVAAAKAAGRPIVALESTIITHGMPYPQNLEVARQVEDDLRAAGVTPATIAVMDGTLHIGLEAHQLEALAQAKGVA-KLSRADIAACMATGGTGATTVSATMIAAHLAGISVFATGGIGGVHRGAESSFDVSADLLELAQTPVTVVAAGAKAILDVAKTLEVLETQGVPV 179
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_SYMTH (Pseudouridine-5'-phosphate glycosidase OS=Symbiobacterium thermophilum GN=psuG PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.817e-45 Identity = 105/182 (57.69%), Postives = 124/182 (68.13%), Query Frame = 2 Query: 134 KNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHG----EHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 K L+ +PEV EAL VVALESTIISHGMPYP+N TA+EVE IVR+ GAVPATIA++ G VGL+ EELE LA +A K + RD+ V+A + GATTV+ T A+ GI VFVTGGIGGVHR D+S+DLT LGRT + VV AG KS+LDI TLE LET GV V Sbjct: 2 KYLLSYTPEVREALDRNRPVVALESTIISHGMPYPENLRTAREVEEIVRSQGAVPATIAVIGGRCKVGLTDEELELLA-TSPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEVFVTGGIGGVHRKSPGDPAQMWDVSADLTVLGRTDITVVCAGAKSVLDIGATLEVLETLGVTV 182
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_RHILO (Pseudouridine-5'-phosphate glycosidase OS=Rhizobium loti GN=psuG PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.679e-45 Identity = 102/179 (56.98%), Postives = 121/179 (67.60%), Query Frame = 2 Query: 131 AKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 A+ + I V++AL+ G VVALESTII+HGMPYP N A VE I+ + GAVPATIA++ G +GLS E E LA G A K +R D+ VA G TTV+ATM A MVGI VF TGGIGGVH+ E + DIS+DL EL RTPV VVSAG K+ILDI +TLE LET GV V Sbjct: 6 ARPFIDIHAPVAQALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIISDGGAVPATIAVIGGRIKIGLSDGERESLAMTGD-AMKLSRADLGFAVAQGRTGGTTVAATMIAAEMVGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVSAGAKAILDIEKTLEVLETRGVPV 183
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_LEGPH (Pseudouridine-5'-phosphate glycosidase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=psuG PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.398e-44 Identity = 97/177 (54.80%), Postives = 128/177 (72.32%), Query Frame = 2 Query: 137 NLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 +L++ + EV +A++ + +VALESTIISHGMPYP N TA EVE I+R GA+PATIA+ +G VGL+ E +E LA L + K +RRDI+ V++ + +TTV+ATMF A M +P+FVTGGIGGVH+ + DIS+DL EL TPV VV +G KSILD+P+TLE LET GV V Sbjct: 4 DLLEFNEEVLDAINDKNPIVALESTIISHGMPYPDNLTTAIEVENIIRRQGAIPATIAMHQGKIRVGLTQEVMEHLA-LQKEVIKASRRDISFVLSRKVTASTTVAATMFCAHMAKLPLFVTGGIGGVHQDVTMSFDISADLIELSNTPVTVVCSGAKSILDLPKTLEVLETFGVPV 179
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_COPPD (Pseudouridine-5'-phosphate glycosidase OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=psuG PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.546e-43 Identity = 92/176 (52.27%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 140 LVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 +++I+P V EA+ VVALESTII+HGMPYP N TA EVE +++ GAVPATI ++ G+ VGLS EE+ L++ K + +D++ A + +G TTVSATMF + GI VF TGGIGGVHR + D+S+DL LG P+ VV AG K+ILD+P TLEYLET GV V Sbjct: 1 MLQIAPHVKEAIETLKPVVALESTIITHGMPYPANLHTALEVEQVIKEAGAVPATIGVINGIIKVGLSEEEITYLSQ-AKDLHKISLKDLSVAAAKKLSGGTTVSATMFASYKAGIQVFATGGIGGVHRDARESFDVSTDLEALGSIPITVVCAGAKAILDLPATLEYLETKGVLV 175
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_RUBXD (Pseudouridine-5'-phosphate glycosidase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=psuG PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.019e-43 Identity = 93/175 (53.14%), Postives = 119/175 (68.00%), Query Frame = 2 Query: 143 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 V+ +PEV+EAL G VVALEST+ISHG+P P N A+ +E VR GAVPAT+ ++ G+ VGL EELE LA + K + RD+ AT +GATTV+AT A++ GI +F TGG+GGVHR + D+S+DL L R PVAVV +G+KSILD+P TLE LET GV V Sbjct: 4 VQPAPEVAEALEGGRPVVALESTLISHGLPRPDNLRVARALEEAVRREGAVPATVGVVGGVARVGLGPEELELLAS--GEVPKLSARDLPAAAATGSSGATTVAATAHLAALCGIKLFATGGLGGVHRGARESWDVSADLAALSRAPVAVVCSGVKSILDVPATLEQLETLGVPV 176
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_STRGG (Pseudouridine-5'-phosphate glycosidase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=psuG PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.915e-42 Identity = 95/174 (54.60%), Postives = 121/174 (69.54%), Query Frame = 2 Query: 149 ISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKA-QKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 +S EV ALS G VVALESTII+HG+P P+N A+E+E +VR+ GAVPAT+A+L+G +GL ++LER+A G A +K RD+A +A +GATTVSAT F A+ GI VF TGG+GGVHR D S+DL L RT + VV AG+KSILD+P TL+ LET GV V Sbjct: 25 LSAEVRAALSTGLPVVALESTIIAHGLPRPRNLSVARELEGLVRSAGAVPATVAVLDGRARIGLDGDQLERVA--GDPAVRKLGHRDLAPALAAGADGATTVSATAFLAARAGIGVFATGGLGGVHREWAENQDESADLRLLARTGITVVCAGVKSILDVPATLQRLETLGVPV 196
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_MYXXD (Pseudouridine-5'-phosphate glycosidase OS=Myxococcus xanthus (strain DK 1622) GN=psuG PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.889e-41 Identity = 89/175 (50.86%), Postives = 112/175 (64.00%), Query Frame = 2 Query: 143 VKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 ++ S EV AL G +VALE+++++ G+PYP N A+ E +R GAVPA AI++G CVGL E+ RLA+ + K A RD A +ATR G TTVSAT A+ GI VF TGGIGGVHR DIS D+ L R PVAVV AG KS+LD+P+T+E LET GV V Sbjct: 3 LRFSEEVRRALEAGQPLVALETSVVAQGLPYPDNLAAARACEEAIRRAGAVPAATAIIDGQLCVGLEEPEMRRLAEGKERLLKVASRDFAVAMATRATGGTTVSATCEMAAAAGIRVFSTGGIGGVHRGASEHFDISQDIAALARFPVAVVCAGAKSVLDLPKTMELLETAGVPV 177
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_SALTO (Pseudouridine-5'-phosphate glycosidase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=psuG PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.223e-41 Identity = 96/183 (52.46%), Postives = 121/183 (66.12%), Query Frame = 2 Query: 119 IDSLAKNLVKISPEVSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 +D++ ++ EV++AL G VVALESTI+SHG+P P N A+E+E VR+ GAVPATI ++ G VGL EL RLA + A K + RD+A AT +GATTV+AT A+ GI VF TGG+GGVHR + D S+DLT L RTP+AVV AG+KSILD TLE LET GV V Sbjct: 15 LDAVTTFHLRHGVEVADALRVGRPVVALESTIVSHGLPRPDNLRVAREIEQTVRDAGAVPATIGMVAGQLVVGLDDAELTRLATVDDVA-KLSVRDLAVAAATDADGATTVAATSAVAAAAGIRVFATGGLGGVHREAAQSFDESADLTTLARTPIAVVCAGVKSILDSGATLERLETLGVGV 196 The following BLAST results are available for this feature:
BLAST of FC921124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921124 ID=FC921124; Name=FC921124; organism=Citrus clementina; type=EST; length=672bpback to top |