FC921124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_GEMAT (Pseudouridine-5'-phosphate glycosidase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=psuG PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.230e-33 Identity = 82/169 (48.52%), Postives = 107/169 (63.31%), Query Frame = 2 Query: 161 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 V EAL G A+VALES++++ G+ P N E A+ + V GA+P AI G P +GL E+LER + +K + RD+ +A +GATTV+AT+ ++ G+ VF TGGIGGVHR + D S+DL EL RTPV VV AG KSILD+P TLE LET GV V Sbjct: 14 VFEALERGAALVALESSVLAQGLEPPYNREAARRMTEAVTAVGAIPVITAISRGTPTLGLDDEDLERFLQRDG-VRKVSARDLGIAMADGADGATTVAATLALCALGGLEVFATGGIGGVHR--DAPFDESADLIELSRTPVIVVCAGAKSILDLPATLERLETLGVPV 179
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_THET2 (Pseudouridine-5'-phosphate glycosidase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=psuG PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.399e-33 Identity = 81/158 (51.27%), Postives = 104/158 (65.82%), Query Frame = 2 Query: 194 VALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 VALES +++HG+PYP N E A +E VR GA P TIA++ G VGLS EE+E LA G A+K + ++A ++A + TTV+AT+ A + GIPVF TGGIGGVH D S+DL L RTP+ VVS+G K+ILD+ TLE LET GV V Sbjct: 6 VALESAVLTHGLPYPLNLEVALALEEAVREEGATPKTIALVRGEVRVGLSPEEMEALAAGG--AEKASLWNLAALLAQGRSAGTTVAATVHLAHLHGIPVFATGGIGGVH---PEPYDESADLVALSRTPILVVSSGPKAILDLRATLERLETLGVSV 158
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_THELT (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=psuG PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.129e-28 Identity = 74/159 (46.54%), Postives = 98/159 (61.64%), Query Frame = 2 Query: 191 VVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLETHGVCV 667 ++ALEST+I+HG+P+P N +TA E+E + G TI I+ G VGLS EE+ ++A K +I +A + ATTVSATM A + I VF TGGIGGVH+ + D+S DL EL RT + VVSAG KSILD+ T+E LET + V Sbjct: 4 ILALESTVIAHGLPFPINIDTAVELEELAAETGCSAKTIGIIAGQIKVGLSREEIVQIAS-RKDVLKIGTAEIPFALAKKMWAATTVSATMRIAHLNNIKVFATGGIGGVHKIDQ--WDVSQDLAELSRTRMIVVSAGPKSILDLRSTVEMLETFQITV 159
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_THEMA (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga maritima GN=psuG PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27 Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 161 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLET 652 + + G VV +E+T+ HG+P + E + + I R G A I IL+G G+S EELE + + G A K R+I VVA N ATTVSAT+F + +GI V VTGG GGVH +D+S DLTE+ + +VS+GIKSILD+ T E LET Sbjct: 3 IESRIEKGKPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREG--ADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMSSSRAVLVSSGIKSILDVEATFEMLET 161
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_THESQ (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga sp. (strain RQ2) GN=psuG PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27 Identity = 71/164 (43.29%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 161 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLET 652 + + G VV +E+T+ HG+P + E + + I R G A I IL+G G+S EELE + + G A K R+I VVA N ATTVSAT+F + +GI V VTGG GGVH +D+S DLTE+ + +VS+GIKSILD+ T E LET Sbjct: 3 IESRIEKGKPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMREG--ADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMSSSRAILVSSGIKSILDVEATFEMLET 161
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_THEP1 (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=psuG PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.707e-27 Identity = 70/164 (42.68%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 161 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLET 652 + + G+ VV +E+T+ HG+P + E + + I R G I IL+G VG+S EELE + + G A K R+I VA N ATTVSAT+F + +GI V VTGG GGVH +D+S DLTE+ + +VS+GIKSILD+ T E LET Sbjct: 3 IESRIEKGNPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLVVIGILKGKIIVGMSEEELETMMREG--ADKIGTREIPIAVAKGKNAATTVSATIFLSRRIGIEVVVTGGTGGVH---PGRVDVSQDLTEMASSRTILVSSGIKSILDVEATFEMLET 161
BLAST of FC921124 vs. ExPASy Swiss-Prot
Match: PSUG_THENN (Pseudouridine-5'-phosphate glycosidase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=psuG PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 65/164 (39.63%), Postives = 92/164 (56.10%), Query Frame = 2 Query: 161 VSEALSHGHAVVALESTIISHGMPYPQNFETAKEVEAIVRNNGAVPATIAILEGLPCVGLSTEELERLAKLGSKAQKTARRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAVVSAGIKSILDIPRTLEYLET 652 V L V +E+T+ HG+P + E ++ + I G A + +L+G +G++ +EL + GS +K R+I +A N ATTVSAT+F GI V VTGG GGVH G +DIS DLTE+ + + +VS+GIKSILD+ T E LET Sbjct: 3 VENRLEKEKPAVGMETTVFVHGLPRKEAIELFRKAKKISEEMGFQLAVVGVLKGKIILGMNEDELTIMMNEGS--EKIGTREIPIALAKGMNAATTVSATIFLCKRFGIDVVVTGGTGGVHPGG---VDISQDLTEMASSRIILVSSGIKSILDVDATFEMLET 161 The following BLAST results are available for this feature:
BLAST of FC921124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921124 ID=FC921124; Name=FC921124; organism=Citrus clementina; type=EST; length=672bpback to top |