FC921149

Overview
NameFC921149
Unique NameFC921149
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDIA1_HUMAN (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 2.084e-16
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  142 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKVFVPG--KPPVDYQGARDVKPIAEFV 441
            V+ L  +NF ++ L A+  +LVEFYAPWCGHC+AL P + KAA  LK   +   +A +DA E   LAQ+YG+RG+PTIK F  G    P +Y   R+   I  ++
Sbjct:   26 VLVLRKSNF-AEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWL 129          

HSP 2 Score: 67.781 bits (164), Expect = 5.874e-11
Identity = 33/103 (32.04%), Postives = 48/103 (46.60%), Query Frame = 1
Query:  139 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPG--KPPVDYQGARDVKPIAEFV 441
            PV  L   NF+    +    V VEFYAPWCGHC+ L PIW+K     K    +     +   +  +   +  FPT+K F     +  +DY G R +    +F+
Sbjct:  368 PVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFL 470          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.722e-16
Identity = 43/119 (36.13%), Postives = 75/119 (63.03%), Query Frame = 1
Query:  103 FNLSDALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAA-TVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPG--KPPVDYQGARDVKPIAEFVLQQ 450
            F   +A+    S VV+L  ++F ++ + ++ +VL EF+APWCGHC+ + P + KAA T+++   T+A +D  E+Q L  E+ I GFP++K+F        +DY+G R  + I +F+++Q
Sbjct:   21 FAQQEAVAPEDSAVVKLATDSF-NEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQ 138          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDIA2_HUMAN (Protein disulfide-isomerase A2 OS=Homo sapiens GN=PDIA2 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.556e-16
Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 1
Query:  181 LNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDANEHQSLAQEYGIRGFPTIKVFVPGK--PPVDYQGARDVKPIAEFVLQQI 453
            L  +  +LVEFYAPWCGHCQAL P + KAA VL     V T+A +D    + LA+E+G+  +PT+K F  G    P +Y G RD + IAE++ +++
Sbjct:   56 LREHPALLVEFYAPWCGHCQALAPEYSKAAAVLAAESMVVTLAKVDGPAQRELAEEFGVTEYPTLKFFRNGNRTHPEEYTGPRDAEGIAEWLRRRV 151          

HSP 2 Score: 69.3218 bits (168), Expect = 2.019e-11
Identity = 31/103 (30.10%), Postives = 53/103 (51.46%), Query Frame = 1
Query:  139 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV--PGKPPVDYQGARDVKPIAEFV 441
            PV  L   NF+    +    V V+FYAPWC HC+ + P WE  A   +    +   + +   +    + + GFPT+K F   PG+  ++Y+  RD++  ++F+
Sbjct:  389 PVKTLVGKNFEQVAFDETKNVFVKFYAPWCTHCKEMAPAWEALAEKYQDHEDIIIAELDATANELDAFAVHGFPTLKYFPAGPGRKVIEYKSTRDLETFSKFL 491          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.556e-16
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  142 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKVFVPG--KPPVDYQGARDVKPIAEFV 441
            V+ L  +NF+ + L A+  +LVEFYAPWCGHC+AL P + K A  LK   +   +A +DA E   LAQ+YG+RG+PTIK F  G    P +Y   R+   I  ++
Sbjct:   28 VLVLKKSNFE-EALAAHKYLLVEFYAPWCGHCKALAPEYAKRAAKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWL 131          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDI_DROME (Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 1
Query:  142 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVL---KGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFVLQQ 450
            V+  T +NFK  + + N  VLVEFYAPWCGHC+AL P + KAA  L   +    +A +DA     LA++Y +RG+PT+K F  G  PV+Y G R    I  +V ++
Sbjct:   29 VLVATVDNFKQLIAD-NEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSGS-PVEYSGGRQAADIIAWVTKK 132          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDI_DATGL (Protein disulfide-isomerase OS=Datisca glomerata GN=PDI PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 1
Query:   73 ILTIFSFFAR-FNLSDALYGSSSP-VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDANE--HQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFVLQQ 450
            +L   +FFA  FN   A    S   V+ L  +NF   V   N +V VEFYAPWCGHC+ L P +EKAA++L        +A +DANE  ++ LA E+ +RGFPTIK+    GK   +Y+G RD   I +++ +Q
Sbjct:   10 LLLFLAFFASSFNEIYAEESESKEFVLTLDKSNFFDTVSKHNFIV-VEFYAPWCGHCKKLAPEYEKAASILSSHDPPVILAKVDANEEANKELASEFEVRGFPTIKILRNGGKIVQEYKGPRDADGIVDYLKKQ 142          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDIA1_RABIT (Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  142 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKVFVPG--KPPVDYQGARDVKPIAEFV 441
            V+ L  +NF  + L A+  +LVEFYAPWCGHC+AL P + KAA  LK   +   +A +DA E   LAQ+YG+RG+PTIK F  G    P +Y   R+   I  ++
Sbjct:   27 VLVLKSSNFAEE-LAAHKHLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSDIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWL 130          

HSP 2 Score: 72.4034 bits (176), Expect = 2.385e-12
Identity = 35/103 (33.98%), Postives = 50/103 (48.54%), Query Frame = 1
Query:  139 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV--PGKPPVDYQGARDVKPIAEFV 441
            PV  L   NF+    +    V VEFYAPWCGHC+ L PIW+K     K    +     +   +  +   +  FPT+K F   PG+  +DY G R +    +F+
Sbjct:  369 PVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKEHQDIVIAKMDSTANEVEAVKVHSFPTLKFFPAGPGRTVIDYNGERTLDGFKKFL 471          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.921e-16
Identity = 54/147 (36.73%), Postives = 87/147 (59.18%), Query Frame = 1
Query:   58 SQLLVILTIFSF-FARFNLSDALYGSSSP--VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK---GVATVAALDANEHQS--LAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFVLQQIKALLKE 471
            S LL +  + S   AR   + A   +++P  V+ L  +NF   +   +  +LVEFYAPWCGHC++L P +EKAA +L        +A +DAN+ ++  LA +Y ++GFPT+K+F   GK   +Y+G R+ + I E++ +Q+    KE
Sbjct:    9 SLLLALAVVLSAPAARAEEAAAAEEAAAPEAVLTLHADNFDDAI-GQHPFILVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRNGGKSIQEYKGPREAEGIVEYLKKQVGPASKE 154          

HSP 2 Score: 75.8702 bits (185), Expect = 2.157e-13
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 1
Query:  130 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV--ATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFV 441
            ++ PV  +  +N    V  +   VL+EFYAPWCGHC+ L PI ++AA  L+      +A +DA E+  +  E+ ++G+PT+    P    V Y+G R    I +++
Sbjct:  379 NNEPVKVVVADNVHDVVFKSGKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKMDATEN-DVPGEFDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYI 483          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.035e-15
Identity = 46/116 (39.66%), Postives = 73/116 (62.93%), Query Frame = 1
Query:  142 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK---GVATVAALDANEHQS--LAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFVLQQIKALLKE 471
            V+ L  +NF   +   +  +LVEFYAPWCGHC++L P +EKAA +L        +A +DAN+ ++  LA +Y ++GFPT+K+F   GK   +Y+G R+ + I E++ +Q+    KE
Sbjct:   41 VLTLHADNFDDAIAK-HPFILVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRSGGKNIQEYKGPREAEGIVEYLKKQVGPASKE 155          

HSP 2 Score: 73.1738 bits (178), Expect = 1.398e-12
Identity = 35/106 (33.02%), Postives = 58/106 (54.72%), Query Frame = 1
Query:  130 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV--ATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFV 441
            ++ PV  +  +N    V  +   VL+EFYAPWCGHC+ L PI ++AA  L+      +A +DA  +  +  E+ ++G+PT+    P    V Y+G R    I +++
Sbjct:  380 NNEPVKVVVADNIHDVVFKSAKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKIDATAN-DVPGEFDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYI 484          
BLAST of FC921149 vs. ExPASy Swiss-Prot
Match: PDI_MEDSA (Protein disulfide-isomerase OS=Medicago sativa GN=PDI PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.035e-15
Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 1
Query:   67 LVILTIFSFFARFNLSDALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVL---KGVATVAALDANE--HQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFVLQQ 450
            L++L     FA  + +DA       V+ L   NF   V   +  ++VEFYAPWCGHC+ L P +EKAA++L   +    +A +DANE  ++ LA E  ++GFPTIK+F   GK   +Y+G R+ + I E++ +Q
Sbjct:   14 LLLLVPSQIFAEESSTDA----KEFVLTLDNTNFHDTV-KKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSTHEPPVVLAKVDANEEHNKDLASENDVKGFPTIKIFRNGGKNIQEYKGPREAEGIVEYLKKQ 142          
The following BLAST results are available for this feature:
BLAST of FC921149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PDIA1_HUMAN2.084e-1644.76Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
PDI_YEAST2.722e-1636.13Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
PDIA2_HUMAN3.556e-1644.79Protein disulfide-isomerase A2 OS=Homo sapiens GN=... [more]
PDIA1_MOUSE3.556e-1643.81Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]
PDI_DROME4.644e-1643.40Protein disulfide-isomerase OS=Drosophila melanoga... [more]
PDI_DATGL4.644e-1641.79Protein disulfide-isomerase OS=Datisca glomerata G... [more]
PDIA1_RABIT4.644e-1644.76Protein disulfide-isomerase OS=Oryctolagus cunicul... [more]
PDI_HORVU7.921e-1636.73Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]
PDI_WHEAT1.035e-1539.66Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_MEDSA1.035e-1538.81Protein disulfide-isomerase OS=Medicago sativa GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32101F11EF RVDevelopN Citrus clementina cDNA clone C32101F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921149 ID=FC921149; Name=FC921149; organism=Citrus clementina; type=EST; length=666bp
GGAAGAAAGAAAAAGAAAATTAAAAATTTCTCGAGAAAGTGACGGAAAAT
GCGCAGATCACAATTGCTTGTCATTTTAACAATCTTCTCATTCTTTGCGC
GCTTCAATCTCAGTGATGCATTGTATGGTTCATCATCACCAGTAGTTCAG
CTCACTCCTAACAACTTCAAGTCCAAGGTCCTGAATGCCAATGGAGTTGT
GTTGGTTGAGTTCTATGCACCTTGGTGTGGTCATTGTCAAGCTTTGACAC
CCATATGGGAGAAAGCAGCTACTGTCTTGAAAGGTGTCGCTACTGTGGCA
GCTCTTGATGCCAATGAACACCAGTCCCTTGCTCAGGAATATGGGATCAG
AGGATTCCCAACCATAAAGGTGTTTGTACCAGGGAAGCCTCCAGTAGATT
ACCAAGGAGCTAGGGATGTCAAACCTATTGCAGAATTTGTACTTCAACAG
ATAAAGGCACTATTGAAGGAACGTCTAAGTGGGAAAGCAACTGGAGGATC
AAGTGATAAATCTAAATCTGATTCTAATGAGTCTATAGAATTGAATTCTA
GCAATTTTGATGAGTTGGTGCTCAAAAGCAAAGATCTTTGGATTGTGGAG
TTTTTTGCACCTTGGTGTGGACACTGTAAAAAGCTGGCTCCTGAGTGGAA
GAAGGCTGCTAATAAC
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