FC921155

Overview
NameFC921155
Unique NameFC921155
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A7_RAT (Solute carrier family 22 member 7 OS=Rattus norvegicus GN=Slc22a7 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14
Identity = 50/173 (28.90%), Postives = 88/173 (50.87%), Query Frame = 2
Query:  158 TTVVFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSLPSGNLTSD 673
            +T  F G+LVGA  +G +SD +GRR  +L   + + V GL+SA + NY                  +      +E++   +R    V+ + FW+ G +  A + +++    +WRWLL  + +P    +I I ++PES R+L T+GR+ +A   L   A+ N   +  G+L+ +
Sbjct:  146 STCFFIGVLVGAVVYGYLSDRFGRRRLLLVAYVSSLVLGLMSAASINYIMFVVTRTLTGSALAGFTIIVLPLELEWLDVEHRTVAGVISTVFWSGGVLLLALVGYLIR---SWRWLLLAATLPCVPGIISIWWVPESARWLLTQGRVEEAKKYLLSCAKLNGRPVGEGSLSQE 315          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A7_HUMAN (Solute carrier family 22 member 7 OS=Homo sapiens GN=SLC22A7 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 2
Query:  158 TTVVFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFN 637
            +T  FAG+LVGA ++G +SD +GRR  +L   + T V GL SA + +Y                  +      +E++   +R    V+ STFWT G +  A + ++   I  WRWLL    +P    ++ + ++PES R+L T+G + +AH  L   A+ N
Sbjct:  148 STFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTFWTGGVMLLALVGYL---IRDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLHCARLN 305          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A7_BOVIN (Solute carrier family 22 member 7 OS=Bos taurus GN=SLC22A7 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 51/174 (29.31%), Postives = 87/174 (50.00%), Query Frame = 2
Query:  155 ITTVVFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVFFSWF-MEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSLPSGNLTSD 673
            I+T  FAG+LVGA  +G +SD +GRR  +L   + +   GL SA + +Y                  +      +E++   +R    V+ STFWT G +  A + +++     WRWLL    +P    ++ + ++PES R+L T+GR+ +AH  L   A+ N   +   +L+ +
Sbjct:  146 ISTFFFAGVLVGAEVYGYLSDRFGRRRLLLVAYVSSLALGLASAASVSYIMFAITRTLTGMALAGFTIIVMPLELEWLDVRHRTVAGVLSSTFWTGGVMLLALIGYLIRD---WRWLLLTVTLPCVPGILTLWWVPESARWLLTQGRVEEAHRYLLRCARLNGPPVGEDSLSRE 316          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A7_RABIT (Solute carrier family 22 member 7 OS=Oryctolagus cuniculus GN=SLC22A7 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13
Identity = 50/173 (28.90%), Postives = 85/173 (49.13%), Query Frame = 2
Query:  158 TTVVFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVFFSWF-MEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSLPSGNLTSD 673
            +T  F G+LVGA ++G +SD +GRR  +L   +   V GL SA + +Y                  +      +E++   +R    V+ STFWT G +  A + +++     WRWLL    +P    ++ + ++PES R+L T+GR+ +A   L   A+ N   +P   L+ +
Sbjct:  146 STFFFVGVLVGAVAFGYLSDRFGRRRLLLVAYVSALVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWLDVEHRIVAGVLSSTFWTGGVMLLALVGYLIRD---WRWLLLAVTLPLAPGILSLWWVPESARWLLTQGRVEEAQRYLLRCARLNGRPVPQDGLSRE 315          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A1_RABIT (Solute carrier family 22 member 1 OS=Oryctolagus cuniculus GN=SLC22A1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.679e-13
Identity = 50/164 (30.49%), Postives = 83/164 (50.61%), Query Frame = 2
Query:  176 GMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSLPSGNL 664
            G  +G+   G I+D +GR++ +L   L+  V+G+L+A AP+Y                  +  ++   EFV    R    +++   ++ G V   AL+ +   I  WRWL    ++P F+ L +   +PESPR+L ++ R TDA  I++ IAQ N   LP  +L
Sbjct:  158 GFFLGSLGVGYIADRFGRKLCLLLTTLINAVSGVLTAVAPDYTSMLLFRLLQGLVSKGSWMSGYTLITEFVGSGYRRTVAILYQVAFSVGLV---ALSGVAYAIPNWRWLQLTVSLPTFLCLFYYWCVPESPRWLLSQKRNTDAVKIMDNIAQKN-GKLPPADL 317          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A2_RAT (Solute carrier family 22 member 2 OS=Rattus norvegicus GN=Slc22a2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 50/174 (28.74%), Postives = 83/174 (47.70%), Query Frame = 2
Query:  161 TVVFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSLPSG--NLTSD 673
            +VV  G  +GA   G ++D +GR+  +L   L+  ++G L A +PNY                  +  +    EFV    R    + +   +T G +  A +A+++     WRWL     +P F  L++   +PESPR+L ++ +I  A  I++ IA+ N  S+P    NLT D
Sbjct:  154 SVVNVGFFIGAMMIGYLADRFGRKFCLLVTILINAISGALMAISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRMVGICYQIAFTVGLLILAGVAYVIP---NWRWLQFAVTLPNFCFLLYFWCIPESPRWLISQNKIVKAMKIIKHIAKKNGKSVPVSLQNLTPD 324          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S226B_XENLA (Solute carrier family 22 member 6-B OS=Xenopus laevis GN=slc22a6-B PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 48/160 (30.00%), Postives = 78/160 (48.75%), Query Frame = 2
Query:  161 TVVFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHV-FFSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFN 637
            ++  AG+LVG+  +G +SD +GRR   +   L  FV G+ +AF+PNY                  +  +S  +E++P  NR          +T G +    LA+I   I  W+WL   ++IP F   ++  ++PES R+L   G+   A   L+ +AQ N
Sbjct:  141 SIYMAGVLVGSILFGGLSDKFGRRPLNIWSNLQMFVTGICAAFSPNYIWYCIFRFLTGVAFSGIVLNSYSLTVEWIPTGNRAFTSTATGYCYTMGQLVLVGLAFI---IRDWQWLQLAASIPFFFYFLYSWWIPESGRWLVLSGKPEVACKALKKVAQIN 297          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A2_HUMAN (Solute carrier family 22 member 2 OS=Homo sapiens GN=SLC22A2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 2
Query:  167 VFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSLPS 655
            V  G  +G+ S G I+D +GR++ +L   L+   AG+L A +P Y                  +  +    EFV    R    + +   +T G +    LA +   +  WRWL    A+P F  L++   +PESPR+L ++ +  +A  I++ IA+ N  SLP+
Sbjct:  156 VNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLL---VLAGVAYALPHWRWLQFTVALPNFFFLLYYWCIPESPRWLISQNKNAEAMRIIKHIAKKNGKSLPA 316          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: S22A1_BOVIN (Solute carrier family 22 member 1 OS=Bos taurus GN=SLC22A1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 2
Query:  176 GMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVF-FSWFMEFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILTWRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSLPSGNL 664
            G  +G+   G I+D +GR++ +L   L     G+L+A AP+Y                     ++   EFV    R    +++   +T G V  + LA+I+     WRWL    ++P F+LL    F+PESPR+L ++ R T+A  I++ IAQ N   LP  +L
Sbjct:  153 GFFLGSLGVGYIADRFGRKVCLLATTLTCASLGVLTAVAPDYTSLLIFRLLQGLVSKGSWTAGYTLITEFVGLGYRRTVAILYQMAFTVGLVLLSGLAYILPH---WRWLQLAVSLPIFLLLFRFWFVPESPRWLLSQKRNTEAIKIMDHIAQKN-GKLPPADL 312          
BLAST of FC921155 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 49/208 (23.56%), Postives = 88/208 (42.31%), Query Frame = 2
Query:   32 GLALAYSGLGWFSEAMEVMILSFVGPAVKSEWGXXXXXXXXITTVVFAGMLVGAYSWGLISDIYGRRMSILGGALVTFVAGLLSAFAPNYXXXXXXXXXXXXXXXXXHVFFSWFM-EFVPPSNRGKWMVVFSTFWTFGSVSEAALAWIVMPILT-WRWLLALSAIPAFVLLIFIVFMPESPRYLCTKGRITDAHNILE*IAQFNQTSL 649
            G    +  LG      +  ++S     ++ +          + + V  G ++GA   G  SD +GRR  +L  A++ FV  L SAF+P +                       ++ E  P   RG    +F      G +      +      T WRW+L  +AIPA +L +  + +PESPR+L   G + +A ++L+ + + +Q ++
Sbjct:    7 GFVYFFGALGGLLFGYDTGVISGAILFIQKQMNLGSWQQGWVVSAVLLGAILGAAIIGPSSDRFGRRKLLLLSAIIFFVGALGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILLAYITNYSFSGFYTGWRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHLDEARHVLDTMNKHDQVAV 214          
The following BLAST results are available for this feature:
BLAST of FC921155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
S22A7_RAT7.890e-1428.90Solute carrier family 22 member 7 OS=Rattus norveg... [more]
S22A7_HUMAN1.030e-1331.68Solute carrier family 22 member 7 OS=Homo sapiens ... [more]
S22A7_BOVIN1.030e-1329.31Solute carrier family 22 member 7 OS=Bos taurus GN... [more]
S22A7_RABIT5.114e-1328.90Solute carrier family 22 member 7 OS=Oryctolagus c... [more]
S22A1_RABIT6.679e-1330.49Solute carrier family 22 member 1 OS=Oryctolagus c... [more]
S22A2_RAT8.723e-1328.74Solute carrier family 22 member 2 OS=Rattus norveg... [more]
S226B_XENLA3.315e-1230.00Solute carrier family 22 member 6-B OS=Xenopus lae... [more]
S22A2_HUMAN5.654e-1228.66Solute carrier family 22 member 2 OS=Homo sapiens ... [more]
S22A1_BOVIN5.654e-1231.10Solute carrier family 22 member 1 OS=Bos taurus GN... [more]
XYLT_LACBR9.645e-1223.56D-xylose-proton symporter OS=Lactobacillus brevis ... [more]

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Properties
Property NameValue
Genbank descriptionC32101G06EF RVDevelopN Citrus clementina cDNA clone C32101G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921155 ID=FC921155; Name=FC921155; organism=Citrus clementina; type=EST; length=689bp
CACTTCATTCATGGGGTTTGGGAAGTTCCAAGGTCTCGCGCTTGCTTATT
CTGGGCTCGGTTGGTTTTCAGAAGCAATGGAGGTTATGATTCTCTCCTTT
GTGGGACCTGCAGTGAAGTCTGAGTGGGGATTGTCCTCAAGTGAAGAGAG
CCTTATAACAACTGTTGTTTTTGCTGGAATGTTAGTTGGCGCATATTCAT
GGGGCCTTATATCTGACATATATGGAAGAAGGATGAGTATCCTTGGTGGA
GCTTTAGTGACTTTTGTAGCTGGGTTATTAAGTGCTTTTGCCCCTAACTA
CATATCATTGTTGATTCTTCGTGGTTTGGCTGGTGCTGGCCTGGGCAGTG
GGCATGTCTTCTTCTCCTGGTTTATGGAATTTGTTCCTCCTTCAAATCGA
GGAAAGTGGATGGTCGTCTTTTCAACTTTCTGGACATTTGGGTCGGTTTC
TGAGGCTGCACTTGCTTGGATCGTCATGCCAATATTGACTTGGAGGTGGC
TACTTGCTTTGTCTGCAATACCTGCATTTGTTCTGCTTATTTTTATTGTT
TTCATGCCAGAGTCTCCAAGATATCTATGTACAAAAGGTAGAATAACTGA
TGCGCATAATATTCTGGAATAAATAGCTCAATTCAACCAAACAAGCCTCC
CTTCTGGCAACCTTACTTCTGATGGAACAATGATCTGGA
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