FC921157

Overview
NameFC921157
Unique NameFC921157
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921157 vs. ExPASy Swiss-Prot
Match: BLH11_ARATH (BEL1-like homeodomain protein 11 OS=Arabidopsis thaliana GN=BLH11 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.671e-36
Identity = 84/224 (37.50%), Postives = 130/224 (58.04%), Query Frame = 2
Query:    2 KYLKAAQQLLDEVVNVRKALRQPDGEKSQSTHEQRMNNSKDGDGGSKDVTSNTQESPSNSPNELSHAERQELQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAICGQIRATRKS-LGEQENSENSKGVGITRLRYVDXXXXXXXXXXHLGMM---QQHAWRPQRGLPESSVSILRAWLFEHFLHPYPRILIKL 661
            +Y KA Q L++EV+++        G + +  +   +N    G        S+  +S   S   +S  E  E+  K+TKLLS+L +V+ R++QY +Q++ V+SSF+ IAG G++K YT LALQ ++RHF  L +AI  Q+ + R+  +   ++       G+++L   D           LG++   Q+HAW+P RGLPE+SV+ILRAWLF+HFLHPYP    KL
Sbjct:   21 RYAKAVQCLVEEVIDI-------GGREVELCNNILINQLFPGRRRPGFALSSEIKSELCSSGFMSLPENHEIHIKITKLLSLLQQVEERFEQYCNQLEQVISSFEEIAGEGSSKVYTGLALQAMTRHFGSLEEAIISQLNSVRRRFIISHQDVPKIISSGLSQLSLFD-GNTTSSSLQRLGLVQGPQRHAWKPIRGLPETSVAILRAWLFQHFLHPYPNEAEKL 236          

HSP 2 Score: 35.4242 bits (80), Expect = 1.671e-36
Identity = 13/23 (56.52%), Postives = 20/23 (86.96%), Query Frame = 1
Query:  640 PKDTDKIMLARQTGLTRSQVSNW 708
            P + +K++LA QTGL+++QVSNW
Sbjct:  230 PNEAEKLVLASQTGLSKNQVSNW 252          
BLAST of FC921157 vs. ExPASy Swiss-Prot
Match: BLH8_ARATH (BEL1-like homeodomain protein 8 OS=Arabidopsis thaliana GN=BLH8 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.092e-31
Identity = 78/216 (36.11%), Postives = 112/216 (51.85%), Query Frame = 2
Query:    2 KYLKAAQQLLDE--VVNVRKALRQPDGEKSQSTHEQRMNNSKDGDGGSKDVTSNTQESPSNSPNELSHAERQELQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAICGQIRATRKSLGEQENSENSKGVGITRLRYVDXXXXXXXXXXHLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYP 643
            ++L+ AQ++L+E  +    K +      +S+ST    M +  D D      +S+++  P    N L  A          KLL + +EV + YK Y HQ+Q V+SSF+ +AG   A PY +LAL+  SR F+ LR AI   ++        Q +S +S G    R +                  QQH WRPQRGLPE +V++LRAWLF+HFLHPYP
Sbjct:  267 RFLEPAQKMLEEFCISYASKII-----SRSESTS---MEDDDDDDDNLSGFSSSSE--PLEPKNRLKKA----------KLLFLQEEVCKWYKLYNHQLQTVMSSFNTVAGLNTATPYISLALKRTSRSFKALRTAIAEHVK--------QISSHSSNGNNNNRFQKRQRSLIGNNVGFE--SQQQHIWRPQRGLPERAVAVLRAWLFDHFLHPYP 452          

HSP 2 Score: 39.2762 bits (90), Expect = 4.092e-31
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 1
Query:  640 PKDTDKIMLARQTGLTRSQVSNW 708
            P D+DK MLA QTGL+R+QVSNW
Sbjct:  452 PTDSDKQMLATQTGLSRNQVSNW 474          
BLAST of FC921157 vs. ExPASy Swiss-Prot
Match: ATH1_ARATH (Homeobox protein ATH1 OS=Arabidopsis thaliana GN=ATH1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.303e-21
Identity = 68/222 (30.63%), Postives = 100/222 (45.05%), Query Frame = 2
Query:    2 KYLKAAQQLLDEVV--NVRKALRQPDGEKSQSTHEQRMNNSK---DGDGGSKDVTSNTQESPSNSPNELSHAERQELQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAICGQIRATRKSL--GEQENSENSKGVGITRLRYVDXXXXXXXXXXHLGMMQQHAWRPQRGLPESSVSILRAWLFEHFLHPYPR 646
            KYL + Q++L      ++  + R  +   + S    R  N     DGD       SN  E+   S       +R+ L+ K T LL +L  VD RY     ++  V+S+F         + +T  ALQT+S  ++ LR+ IC +I +    L  G+ +  E S                       L       WRPQRGLPE SVS+LR W+F++FLHPYP+
Sbjct:  206 KYLHSVQEILSHFAAYSLDYSSRGTESGAASSAFTSRFENITEFLDGD-------SNNSEAGFGST-----FQRRALEAKKTHLLDLLQMVDDRYSHCVDEIHTVISAFHAATELDP-QLHTRFALQTVSFLYKNLRERICKKIISMGSVLERGKDKTQETSM-------------FHQHCLLQQLKRKNHQIWRPQRGLPEKSVSVLRNWMFQNFLHPYPK 401          

HSP 2 Score: 37.7354 bits (86), Expect = 1.303e-21
Identity = 16/23 (69.57%), Postives = 21/23 (91.30%), Query Frame = 1
Query:  640 PKDTDKIMLARQTGLTRSQVSNW 708
            PKD++K +LA ++GLTRSQVSNW
Sbjct:  400 PKDSEKHLLAIRSGLTRSQVSNW 422          
The following BLAST results are available for this feature:
BLAST of FC921157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
BLH11_ARATH1.671e-3637.50BEL1-like homeodomain protein 11 OS=Arabidopsis th... [more]
BLH8_ARATH4.092e-3136.11BEL1-like homeodomain protein 8 OS=Arabidopsis tha... [more]
ATH1_ARATH1.303e-2130.63Homeobox protein ATH1 OS=Arabidopsis thaliana GN=A... [more]

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Properties
Property NameValue
Genbank descriptionC32101G08EF RVDevelopN Citrus clementina cDNA clone C32101G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921157 ID=FC921157; Name=FC921157; organism=Citrus clementina; type=EST; length=708bp
CAAATACCTCAAGGCAGCCCAACAATTGCTAGACGAAGTTGTTAATGTTC
GGAAAGCTCTGAGGCAGCCTGATGGTGAGAAAAGCCAAAGCACGCATGAG
CAACGGATGAACAATTCCAAGGATGGTGATGGAGGATCAAAAGATGTTAC
TTCAAATACTCAAGAATCTCCCAGTAATTCACCGAATGAGCTTTCACATG
CTGAAAGACAAGAATTGCAGAACAAGTTGACAAAGCTTTTATCCATGTTA
GATGAGGTTGATAGAAGGTATAAACAGTATTATCATCAGATGCAAATAGT
AGTGTCATCATTTGATGTGATAGCTGGATGTGGGGCAGCTAAACCATACA
CAGCATTAGCTCTGCAGACCATCTCCCGTCACTTCAGGTGTTTGCGTGAT
GCTATCTGCGGCCAAATTCGAGCAACCCGCAAAAGCCTTGGAGAGCAAGA
GAATTCTGAAAACAGTAAAGGTGTTGGAATAACTCGCCTCAGATATGTGG
ATCAGCAGCTCAGGCAACAGCGGGCACTTCAGCACCTCGGTATGATGCAA
CAACATGCCTGGAGGCCACAAAGGGGGCTGCCTGAGAGCTCTGTCTCAAT
TCTTCGTGCCTGGCTATTTGAGCATTTCCTTCATCCTTACCCAAGGATAC
TGATAAAATTATGCTGGCAAGACAGACTGGCTTGACTAGAAGTCAGGTTT
CAAATTGG
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