FC921175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.951e-28 Identity = 68/173 (39.31%), Postives = 103/173 (59.54%), Query Frame = 1 Query: 139 NESPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 ++SPG +S A T E + +V E+ D G P+V L + V V++GEE+E + +AKLYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P M++Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 143 SKSPGKLNQSGASVGTDE----DSDVTQEEERD-GQHFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKILQNYENKQVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWVWTACDFADGERKIEHLAVRFKLQDVADSFKKIFDEAKVAQEK 310 HSP 2 Score: 120.939 bits (302), Expect = 6.276e-27 Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 196 DHREEEVPHNEDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRF 588 D +EEV HNED PIV L EV V +GEEDE+ + +AKLYR+D++ +QWK+RG G +K+L H V R++MR+ + K+CANH++ M ++ ++ + VW A+DYADGE K E +RF Sbjct: 759 DGSDEEVVHNED----IHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDREASQWKDRGVGDIKILWHTVKNYFRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRF 885
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RGPD4_HUMAN (RANBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens GN=RGPD4 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.677e-28 Identity = 66/171 (38.60%), Postives = 99/171 (57.89%), Query Frame = 1 Query: 145 SPGTGKKSEAMASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 SP + T+ G E +V E+ D G P+V L + V V++GEE+E + +A+LYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P MS+Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 1301 SPSKSPAKLNQSGTSVGTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEKVVFSHRAELYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHTITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 1470 HSP 2 Score: 111.309 bits (277), Expect = 4.973e-24 Identity = 52/155 (33.55%), Postives = 93/155 (60.00%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ + ++ P+V++ E+V + GEE E + KL+RFD + QWKERG G +K+LK++V GK R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 1012 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVIGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKPRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFEE 1166
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RGPD1_HUMAN (RANBP2-like and GRIP domain-containing protein 1 OS=Homo sapiens GN=RGPD1 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.265e-27 Identity = 64/160 (40.00%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 178 ASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 + T+ G E +V E+ D G P+V L + V V++GEE+E + +A+LYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P MS+Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 1296 SGTSVGTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 1454 HSP 2 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 53/155 (34.19%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ ++ P+V++ E+V + TGEE E + KL+RFD + +QWKERG G +K+LK++V GK R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 996 ANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEISQWKERGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFKQKFEE 1150
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RGPD8_HUMAN (RANBP2-like and GRIP domain-containing protein 8 (Fragment) OS=Homo sapiens GN=RGPD8 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.817e-27 Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 205 EEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 EE V E+E G P+V L + V V++GEE+E + +A++YR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P MS+Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 309 EESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 459 HSP 2 Score: 114.775 bits (286), Expect = 4.498e-25 Identity = 53/155 (34.19%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ + ++ P+V++ E+V + TGEE E + KL+RFD + QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 1 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFEE 155
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RGPD6_HUMAN (RANBP2-like and GRIP domain-containing protein 6 OS=Homo sapiens GN=RGPD6 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.817e-27 Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 205 EEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 EE V E+E G P+V L + V V++GEE+E + +A++YR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P MS+Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 1319 EESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 1469 HSP 2 Score: 114.775 bits (286), Expect = 4.498e-25 Identity = 53/155 (34.19%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ + ++ P+V++ E+V + TGEE E + KL+RFD + QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 1011 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFEE 1165
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RGPD5_HUMAN (RANBP2-like and GRIP domain-containing protein 5 OS=Homo sapiens GN=RGPD5 PE=1 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 2.817e-27 Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 205 EEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 EE V E+E G P+V L + V V++GEE+E + +A++YR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P MS+Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 1319 EESVVTQEEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 1469 HSP 2 Score: 114.775 bits (286), Expect = 4.498e-25 Identity = 53/155 (34.19%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ + ++ P+V++ E+V + TGEE E + KL+RFD + QWKERG G +K+LK++V GK+R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 1011 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFEE 1165
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RGPD2_HUMAN (RANBP2-like and GRIP domain-containing protein 2 OS=Homo sapiens GN=RGPD2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.817e-27 Identity = 64/160 (40.00%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 178 ASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 + T+ G E +V E+ D G P+V L + V V++GEE+E + A+LYR+DKD QWKERG G +K+L++ +VR+VMR+ + LK+CANH + P MS+Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 561 SGTSVGTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHMAELYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 719 HSP 2 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 53/155 (34.19%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ ++ P+V++ E+V + TGEE E + KL+RFD + +QWKERG G +K+LK++V GK R++MR+ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 261 ANKANTSGDFEKDDDACKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEISQWKERGLGNLKILKNEVNGKPRMLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFKQKFEE 415
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RGPD3_HUMAN (RANBP2-like and GRIP domain-containing protein 3 OS=Homo sapiens GN=RGPD3 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.398e-26 Identity = 62/160 (38.75%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 178 ASTTEGDHREEEVPHNEDEDTGAQVAPIVKLEE-VAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHEVAESQKR 654 + T+ G E +V E+ D G P+V L + V V++GEE+E + +A+ YR+DKD QWKERG G +K+L++ VR++MR+ + LK+CANH + P MS+Q G ++ VW A D+ADGE K E +RF SF ++ E +Q++ Sbjct: 1312 SGTSVGTDEESDVTQEEERD-GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEFYRYDKDVGQWKERGIGDIKILQNYDNKHVRILMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDVADSFKKIFDEAKTAQEK 1470 HSP 2 Score: 114.775 bits (286), Expect = 4.498e-25 Identity = 53/155 (34.19%), Postives = 96/155 (61.94%), Query Frame = 1 Query: 172 AMASTTEGDHREEEVPHNEDEDTGAQVAPIVKL-EEVAVTTGEEDEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHAADYADGELKDELFCIRFGSV*ELQSFMEMVHE 633 A + T GD +++ + ++ P+V++ E+V + TGEE E + KL+RFD + +QWKERG G +K+LK++V GKVR++M++ + LK+CANH + M+++ +G+D++ +W A+D++DG+ K E +F + + F + E Sbjct: 1012 ANKANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVSQWKERGLGNLKILKNEVNGKVRMLMQREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFKQKFEE 1166
BLAST of FC921175 vs. ExPASy Swiss-Prot
Match: RANG_DICDI (Ran-specific GTPase-activating protein homolog OS=Dictyostelium discoideum GN=ranbp1 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.002e-24 Identity = 68/163 (41.72%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 160 KKSEAMASTTEGDHREEE-------VPHNEDEDTGAQVAPIVKLEE------VAVTTGEEDEDAILDLKAKLYRFDKDGN-QWKERGAGTVKLLKHKVTGKVRLVMRQSKTLKICANHLVLPMMSVQEHAGNDKSCVWHA-ADYADGELK---DELFCIRFGS 594 KK E +TT + EE+ P E ++ A V P V+ E V V T EE+ED + +++AKLYRFD D + QWKERG G V+ L+ K + ++R+VMR+ KTLK+C NH + P +S+ E G+DKS VW D++D E +ELF IRF + Sbjct: 6 KKEEETTTTTTVEKTEEKKEETSSFAPAAEIKEYAADVEPNVEYEATLKRDVVEVKTNEENEDTLFEIRAKLYRFDTDPSPQWKERGTGNVRFLEDKDSKRIRVVMRRDKTLKVCLNHHISPALSLGEMTGSDKSWVWKCPKDFSDEEKPEGVEELFAIRFAT 168 The following BLAST results are available for this feature:
BLAST of FC921175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921175 ID=FC921175; Name=FC921175; organism=Citrus clementina; type=EST; length=692bpback to top |