FC921223

Overview
NameFC921223
Unique NameFC921223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34
Identity = 82/157 (52.23%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF E LYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR V+ I  + PSALA+ +   VL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34
Identity = 82/157 (52.23%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF E LYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR V+ I  + PSALA+ +   VL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34
Identity = 82/157 (52.23%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF E LYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR V+ I  + PSALA+ +   VL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34
Identity = 82/157 (52.23%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF E LYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR V+ I  + PSALA+ +   VL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34
Identity = 79/157 (50.32%), Postives = 104/157 (66.24%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPN-GPSALAVRKPPGVL 609
            EL   A+ + +PG+GILA DES  +  KRL  IG+ENTE NR+ YR LL +A   + + I G I F E LYQ+T DG     ++ ++ IV GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR+V+ I +  PS LA+ +   VL
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFSADERIDKCIGGVIFFHETLYQNTDDGTNFAQLIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISDTTPSELAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.623e-34
Identity = 81/157 (51.59%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF E LYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR V+ I  + PS+LA+ +   VL
Sbjct:   15 ELADIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSSLAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34
Identity = 82/157 (52.23%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            EL   A  + +PG+GILA DES  +  KRL SIG ENTE NR+ YR LL+TA   +   I G ILF E LYQ   DG+    V+  +  V GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR V+ I  + PSALA+ +   VL
Sbjct:   15 ELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIVGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.180e-34
Identity = 79/157 (50.32%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  145 ELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            EL   A+ + +PG+GILA DES  +  KRL  IG+ENTE NR+ YR LL TA   + + I G I F E LYQ   DG     ++ ++ IV GIKVDKG+VPLAG+N E+  QGLDGL+ R A Y + GA FAKWR+V+ I    PS LA+ +   VL
Sbjct:   15 ELQDIAQRIVAPGKGILAADESTGSMAKRLNPIGVENTEENRRLYRQLLFTADERMDKCIGGVIFFHETLYQKADDGTPFAKMIKDRGIVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRSVLKISETSPSELAIMENANVL 171          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.988e-32
Identity = 71/152 (46.71%), Postives = 89/152 (58.55%), Query Frame = 1
Query:  136 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLA-GSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAV 588
            Y  EL++TAK + +PG+G+LA DES  +C KR A IGL NT  +R+ YR L++   G  QYISG IL +E +YQ    G+     L  + +VPGIK D GL PL  G+  E    GLDG   R   YY  G RF KWR V  I NG  + AV
Sbjct:   22 YEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAV 173          
BLAST of FC921223 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 3.391e-32
Identity = 78/170 (45.88%), Postives = 105/170 (61.76%), Query Frame = 1
Query:  106 PSSLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQYISGAILFEEALYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVRKPPGVL 609
            P S    +     EL   A  + +PG+GILA DES  +  KRL+ IG+ENTE NR+ YR +L +A   + + I G I F E LYQ   +G   +  ++++ IV GIKVDKG+VPLAG++ E+  QGLDGL+ R A Y + GA FAKWR V+ I    PSALA+ +   VL
Sbjct:    2 PHSYPALSAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFIRTILDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVL 171          
The following BLAST results are available for this feature:
BLAST of FC921223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALDOA_RABIT2.774e-3452.23Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PONAB2.774e-3452.23Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALDOA_MOUSE2.774e-3452.23Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN2.774e-3452.23Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDCB_DANRE2.774e-3450.32Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOA_RAT3.623e-3451.59Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_PANTR4.732e-3452.23Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOC_CARAU6.180e-3450.32Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALF_TRYBB1.988e-3246.71Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALDOC_PANTR3.391e-3245.88Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]

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Properties
Property NameValue
Genbank descriptionC32102F01EF RVDevelopN Citrus clementina cDNA clone C32102F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921223 ID=FC921223; Name=FC921223; organism=Citrus clementina; type=EST; length=648bp
GCATCTTTACTCAAGTCATCATCCCCCGCTCTTGACAAGTCTGAGTGGGT
TAAGGGCCAGGCCATCCGCCAGTCTACTGTCTCAGTCCGCAGCCTCCCCA
GTGGCCCCTCTTCCCTCACCATCCGTGCTGGTTCCTATGCCGATGAGCTT
GTCAAGACCGCGAAAACTGTTGCATCACCAGGACGTGGAATTTTGGCCAT
GGATGAGTCAAATGCAACTTGTGGAAAACGCCTTGCCTCAATTGGGTTAG
AGAACACTGAGGCTAACCGCCAGGCATACCGTACCCTCCTTGTTACAGCC
CCTGGTCTTGGACAGTACATCTCTGGTGCCATCCTTTTTGAGGAGGCTCT
CTACCAATCCACCACCGATGGCAAGAAGATGGTCGATGTTCTTGTTGAGC
AAAACATTGTCCCCGGTATCAAAGTCGACAAGGGTTTGGTGCCCCTTGCT
GGTTCCAATGATGAGTCATGGTGCCAGGGTCTTGATGGCCTGGCTTCTCG
CACTGCTGCTTACTACCAACAGGGAGCTCGTTTCGCCAAATGGCGTACTG
TTGTGAGCATTCCCAATGGCCCATCTGCCTTGGCAGTCAGGAAGCCGCCT
GGGGTCTTGCCCGCTATGCTGCCATTGCTCAAGAAACGGATTGGTCCC
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