FC921224

Overview
NameFC921224
Unique NameFC921224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 74/193 (38.34%), Postives = 108/193 (55.96%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEKDIAGLNMYDILEP 574
            +E+GP   +     G+LP L    YSWTK SS+I+LD P G G SYS  +      D   A   H FL KW   + EF +NPF++ G+SY+G+ VP    E+ KG      P +N +GY++GN +TD   D N+ +PF HGM LISD+L+E ++  C+G++ N  P +  C   + E  K    +    I++P
Sbjct:   96 FENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGMVVPATVQEISKGNYECCNPPINLQGYVLGNPLTDFVYDYNSRIPFAHGMALISDELFESLKKTCKGDYRNVHPRNTECLKFIEEFNKCTNSICQRRIIDP 288          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 73/193 (37.82%), Postives = 111/193 (57.51%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNF--YNPLSEACDSKLSEVEKDIAGLNMYDILEP 574
            +E+GP   +     GS+P L    YSWTK+++II+LD P G G SYS         D       + FL KW   + +F +NPF++ G+SY+G+ VP L  E+ KG        +N +GY++GN +TD E + N  +P+ HGM LISD+LY+ ++ +C+GN+   + L+  C   + + +K I  LN Y IL P
Sbjct:   89 FENGPVALKFEVYNGSVPSLVSTTYSWTKMANIIFLDQPVGSGFSYSRTPLVDKISDTGEVKRIYEFLQKWLSKHQQFFSNPFYVGGDSYSGMIVPPLVQEIGKG-----NYQINLQGYILGNPITDTESEQNYQIPYAHGMALISDELYKSMERICKGNYVKVDSLNTKCYKLIKDYQKCIHKLNKYHILLP 276          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 2
Query:   68 NPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT-GDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFY-NPLSEACDSKLSEVEKDIAGLNMYDILEPC 577
            NPYSW +VS+I+Y++ P GVG SYS +  DY    D++ ASD +  L  +   +P+F+    ++AGESY G+YVPT AY +++G   G++P +N  G LVGNGVTD E D N++ P +    LIS   YEE    CQG+FY N    AC   L++    +  +N Y I + C
Sbjct:   96 NPYSWNRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRFPQFIGRETYLAGESYGGVYVPTTAYNIVEGNGKGQQPYVNLVGILVGNGVTDAEADSNSIPPMMKYHSLISIKYYEEGYKACQGDFYANQNLPACQKFLTDSSNAMGNINPYYIYDSC 267          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33
Identity = 78/200 (39.00%), Postives = 117/200 (58.50%), Query Frame = 2
Query:    5 EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLC----QGNFYNPLSEACDSKLSEVEKDI--AGLNMYDILEPCYHG 586
            EHGPF  +          L  NPY+W  +++++Y++SPAGVG SYS++K  YVT D + A + +  L  +F L+PE+  N  F+ GESYAGIY+PTLA  VM      + P +N +G  VGNG+   E + N+LV F +  GL+ + L+  +Q  C    + NFY+     C + L EV + +  +GLN+Y++  PC  G
Sbjct:   92 EHGPFLIQPDGVT-----LEYNPYAWNLIANVLYIESPAGVGFSYSDDKM-YVTNDTEVAENNYEALKDFFRLFPEYKDNKLFLTGESYAGIYIPTLAVLVM------QDPSMNLQGLAVGNGLASYEQNDNSLVYFAYYHGLLGNRLWTSLQTHCCAQNKCNFYDNKDPECVNNLLEVSRIVGKSGLNIYNLYAPCAGG 279          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.653e-33
Identity = 73/196 (37.24%), Postives = 111/196 (56.63%), Query Frame = 2
Query:    5 EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT-GDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYNPLSEACDSKLSEVEKDIAGLNMYDILEPCYHGN 589
            E GPF+ +A         L++N YSW + ++I++LD+P GVG SYS   +D  + GD +TA D+  FLLKW E +PE+    F+I GESYAG Y+P L+  ++K     +K  +N KGY+VGNG+ D+  D   L  ++  +G ISD  Y  +Q  C    +   S+ C+  L   +K+I  ++ Y +  P    N
Sbjct:  103 EIGPFHIKADGKT-----LYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIVKHNQGSDKNSINLKGYMVGNGLMDDFHDRLGLFQYIWSLGFISDQTYSLLQLQCGFESFIHSSKQCNKILEIADKEIGNIDQYSVFTPACVAN 293          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.653e-33
Identity = 78/217 (35.94%), Postives = 118/217 (54.38%), Query Frame = 2
Query:    5 EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT-GDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYNPLSEACDSKLSEVEKDIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGE 652
            E GPF+  A   KG    +H+NPYSW +V++I++LDSP GVG SYS    D ++ GD +TA D+  FL KW E +P++    F++ GESYAG YVP LA  + +  +A     +N KGY+VGN +TD+  D   +  ++   GLISD  Y+ +   C    +   S  CD  L     +   ++ Y I  P  H +     A++  ++    R +G+
Sbjct:   66 EVGPFHVNADG-KG----VHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQAIKRHHEATGDKSINLKGYMVGNALTDDFHDHYGIFQYMWTTGLISDQTYKLLNIFCDFESFVHTSPQCDKILDIASTEAGNIDSYSIFTPTCHSS----FASSRNKVVKRLRSVGK 273          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33
Identity = 79/200 (39.50%), Postives = 115/200 (57.50%), Query Frame = 2
Query:    5 EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLC----QGNFYNPLSEACDSKLSEVEKDI--AGLNMYDILEPCYHG 586
            EHGPF  +          L  NPYSW  +++++YL+SPAGVG SYS++K  Y T D + A      L  +F L+PE+  N  F+ GESYAGIY+PTLA  VM      + P +N +G  VGNG++  E + N+LV F +  GL+ + L+  +Q  C    + NFY+     C + L EV + +  +GLN+Y++  PC  G
Sbjct:   97 EHGPFLVQPDGVT-----LEYNPYSWNLIANVLYLESPAGVGFSYSDDKF-YATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVM------QDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNKCNFYDNKDLECVTNLQEVARIVGNSGLNIYNLYAPCAGG 284          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33
Identity = 80/200 (40.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:    5 EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLC----QGNFYNPLSEACDSKLSEVEKDIA--GLNMYDILEPCYHG 586
            EHGPF  +          L  NPYSW  +++++YL+SPAGVG SYS++K+ Y T D + A      L  +F L+PE+  N  F+ GESYAGIY+PTLA  VM      + P +N +G  VGNG++  E + N+LV F +  GL+ + L+  +Q  C    Q NF++     C + L EV   +A  GLN+Y++  PC  G
Sbjct:   96 EHGPFLIQPDGVT-----LEYNPYSWNLIANVLYLESPAGVGFSYSDDKS-YATNDTEVAQSNFEALKDFFCLFPEYKGNELFLTGESYAGIYIPTLAVLVM------QDPSMNLQGLAVGNGLSSYEQNDNSLVYFAYYHGLLGNRLWSSLQTHCCSQNQCNFHDNKEPECVANLQEVSHIVASSGLNIYNLYAPCAGG 283          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.911e-33
Identity = 72/180 (40.00%), Postives = 98/180 (54.44%), Query Frame = 2
Query:    2 YEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEK 535
            Y++GP   +     G+LP L    YSWTK SS+I+LD P G G SYS  +      D   A   H FL KW   + EF +NPF++ G+SY+G+ VP    E+ KG        +N +GY++GN +TD   D N  VPF H M LISD+LYE ++  C+G + N  P    C   + E  K
Sbjct:   96 YQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGLVVPATVQEISKGNCQCCNRPINLQGYVLGNPLTDCVYDCNYRVPFAHKMALISDELYESLKRTCRGEYVNVHPHDTECLKFVEEFNK 275          
BLAST of FC921224 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.720e-32
Identity = 69/173 (39.88%), Postives = 103/173 (59.54%), Query Frame = 2
Query:   59 LHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTD-YVTGDLKTASDTHTFLLKWFELYPEFLTNPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYNPLSEACDSKLSEVEKDIAGLNMYDILEP 574
            L +N Y W KV+++++LDSPAGVG SY+   +D Y +GD +TA D++ FL KWFE +P +    F+IAGESYAG YVP L+  V +     + PV+N KG++VGNG+ D+  D      F    G++SDD Y  ++  C  + +   S ACD+       +   ++MY +  P
Sbjct:   88 LVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHR----SKNPVINLKGFMVGNGLIDDYHDYVGTFEFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTP 256          
The following BLAST results are available for this feature:
BLAST of FC921224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
SCP3_ARATH3.702e-3538.34Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]
SCP13_ARATH3.702e-3537.82Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
NF314_NAEFO3.702e-3542.44Virulence-related protein Nf314 OS=Naegleria fowle... [more]
PPGB_MOUSE2.032e-3339.00Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
SCP29_ARATH2.653e-3337.24Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP22_HORVU2.653e-3335.94Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
PPGB_HUMAN4.526e-3339.50Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
PPGB_BOVIN4.526e-3340.00Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
SCP4_ARATH5.911e-3340.00Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
CBP2_WHEAT1.720e-3239.88Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32102F02EF RVDevelopN Citrus clementina cDNA clone C32102F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921224 ID=FC921224; Name=FC921224; organism=Citrus clementina; type=EST; length=696bp
ATATGAGCACGGGCCTTTCAATTTTGAAGCACCAACGACAAAGGGAAGTC
TGCCCAAGTTGCATGTCAATCCATATAGCTGGACCAAGGTTTCTAGCATT
ATATATTTAGATTCCCCAGCTGGTGTTGGACTTTCTTACTCAGAAAATAA
AACTGATTATGTTACTGGGGACTTAAAGACTGCCTCTGATACACACACAT
TTCTCCTCAAGTGGTTTGAATTATACCCGGAGTTCCTAACCAACCCATTT
TTTATTGCTGGAGAGTCATATGCTGGGATATATGTGCCCACTCTTGCTTA
TGAAGTGATGAAAGGAATTGATGCTGGTGAAAAACCTGTTCTGAACTTCA
AGGGATATCTGGTGGGAAATGGAGTAACAGATGAAGAGATTGATGGGAAC
GCGCTTGTTCCATTTGTGCATGGGATGGGTCTGATATCAGATGACCTATA
TGAGGAGGTGCAAAATTTGTGCCAAGGAAATTTCTATAACCCACTCAGTG
AGGCTTGTGACAGCAAGCTTTCTGAAGTTGAGAAGGATATTGCAGGTTTA
AACATGTATGATATTTTAGAGCCGTGCTATCATGGCAATGAGACATGGGA
GATTGCAGCCGCTAACATTAGGTTACCATCCAGCTTCCGGCAGTTGGGTG
AGACTGATAGGCCTCTTCCTGTGAGGATAGGATGTTTGGTCGTGCC
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