FC921244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BACC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain ATCC 10987) GN=ispF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.156e-33 Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 2 Query: 308 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 667 FR+G GFD+H G PLIIGG+ +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGVTIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_AQUAE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Aquifex aeolicus GN=ispF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.156e-33 Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 670 + R+G GFD H G LI+GG+ + + G + HSDGD LLH + DAILGALG DIG+IF D+DP+WK APS +F+++A+ +M E G+ I N+D ++ RPK++P+KE I+ +LS+LLG Sbjct: 1 MELRIGFGFDSHEFVEGKLLILGGVEIEKDYGLKGHSDGDALLHAITDAILGALGERDIGEIFKDTDPRWKNAPSRIFLEKALEVMSEKGFNISNIDCVIVADRPKIAPHKERIKESLSKLLG 123
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BACC4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus (strain B4264) GN=ispF PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.734e-33 Identity = 64/120 (53.33%), Postives = 87/120 (72.50%), Query Frame = 2 Query: 308 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 667 FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWGFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_THISH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ispF PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.149e-32 Identity = 60/120 (50.00%), Postives = 88/120 (73.33%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 670 R+GHG+D+H + G +++GG+ +PH + AHSDGDVL+H + DA+LGA L DIG+ FPD+DP +KGA S V ++ V L+ E GY +GN+DAT+I Q PK++P+ E +R NL++ LG Sbjct: 5 RIGHGYDVHAFKAGGHVVLGGVRIPHAKAFAAHSDGDVLIHALCDALLGAAALGDIGRHFPDTDPAYKGADSRVLLRRVVELLHEQGYRVGNVDATIIAQAPKMAPHIEAMRANLADDLG 124
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_GEOMG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ispF PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.500e-32 Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 676 R+GHG+D+H L G LI+GG++VP+ERG HSD DVLLH + DAILGAL L DIG+ FPD+DP++KGA S ++ + L + GY +GN+DAT++ QRPKL+P+ +R NL+E L A+ Sbjct: 2 RIGHGYDVHCLVEGRKLILGGVDVPYERGLLGHSDADVLLHAIADAILGALALGDIGKHFPDTDPQFKGADSRKLLRHVMALAGQKGYVLGNVDATIVAQRPKLAPFIPEMRANLAEDLIAE 123
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_RALEH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ispF PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.959e-32 Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 2 Query: 302 LPF--RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 670 +PF RVG G+D+H L PG LI+GG+ +PH+RG HSD D LLH V DA+ GA L DIG+ FPD+D ++ GA S V ++EA R + EAGYEIGN+DAT+I Q PKL+P+ + NL+E LG Sbjct: 2 MPFDIRVGQGYDVHALVPGRKLILGGVEIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHFPDTDAQFAGADSRVLLREAARRVREAGYEIGNVDATVIAQAPKLAPHIGAMVANLAEDLG 126
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_PECCP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ispF PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.959e-32 Identity = 62/117 (52.99%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSE 661 R+GHGFD+H+ PL+IGG+ +P+ +G AHSDGDV+LH V DA+LGA L DIG++FPD+DP +KGA S ++EA R ++E GY++GNLD T+I Q PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGGEGPLVIGGVRIPYTQGLLAHSDGDVVLHAVTDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAWRRINEKGYQLGNLDVTIIAQAPKMAPHIPQMRVNLAE 118
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BACCN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=ispF PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.959e-32 Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 2 Query: 308 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 667 FR+G GFD+H G PLIIGGI +P+E+G HSD DVLLH + DA LGA+ DIG+ FPD+DP +K A S+V +++ + E GYE+GNLD T+I Q+PK++P+ E++R +SELL Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPYEKGLLGHSDADVLLHTIADACLGAIAAGDIGKHFPDTDPAFKDADSAVLLQKVWEFVREQGYELGNLDCTIIAQKPKMAPHIESMRKRISELL 121
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_RALSO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia solanacearum GN=ispF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.559e-32 Identity = 64/126 (50.79%), Postives = 88/126 (69.84%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADP 679 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + EAGY++GN+DAT+I Q+PKL+P+ + NL+ LG P Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVREAGYDVGNVDATVIAQKPKLAPHVPGMVANLAADLGIAP 129
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_RALPJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia pickettii (strain 12J) GN=ispF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.559e-32 Identity = 64/126 (50.79%), Postives = 88/126 (69.84%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADP 679 + R+G G+D+H L G LI+GG+ +PH RG HSD D LLH + DA+ GA GL DIG+ FPD+DP + GA S V ++EAVR + +AGY +GN+DAT+I Q+PKL+P+ + NL+E LG P Sbjct: 4 MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIGRHFPDTDPAFAGADSRVLLREAVRRVHKAGYAVGNVDATVIAQKPKLAPHVPGMVANLAEDLGIAP 129 The following BLAST results are available for this feature:
BLAST of FC921244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921244 ID=FC921244; Name=FC921244; organism=Citrus clementina; type=EST; length=748bpback to top |