FC921244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_PORGI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Porphyromonas gingivalis GN=ispF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.303e-31 Identity = 58/121 (47.93%), Postives = 85/121 (70.25%), Query Frame = 2 Query: 305 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 667 PFR+G GFD+HRL GYPL +GG+ + H +G E HSD DVL+H + DA+LGA L DIG FP SDP++KG S + + + L+ GYE+GN+DAT+ ++PKL+P+ ++ L+E++ Sbjct: 4 PFRIGFGFDVHRLSEGYPLWMGGVRLEHSKGLEGHSDADVLIHAICDALLGAAALRDIGYHFPPSDPQYKGIDSKILLARVMELVRSQGYELGNIDATIAAEQPKLNPHIPDMQRVLAEVI 124
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_CYAP4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.303e-31 Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADP 679 R+G+G+D+HRL PLI+GG+N+PHE G HSD DVL H ++DA+LGAL L DIG FP DP+W GA S + + +L+ E G+++GN+D+ ++ +RPKL P+ +R LS +L P Sbjct: 5 RIGNGYDIHRLVSDRPLILGGVNIPHELGLLGHSDADVLTHAIMDALLGALSLGDIGHYFPPGDPQWAGADSLKLLAQVHQLVQERGWQVGNIDSVIVAERPKLKPHLAAMRDRLSAVLKVKP 127
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BACSK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=ispF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.303e-31 Identity = 59/122 (48.36%), Postives = 87/122 (71.31%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 676 R+G GFD+H+L G PL++GG+++PH +G HSD DVLLH + DA LGA+G D+G+ FPD+D +K A S + +A +L+ AGY +GN+D T++ Q+PKL+PY E +R ++ELL D Sbjct: 3 RIGQGFDVHQLTEGRPLLLGGVHIPHPKGLLGHSDADVLLHTITDAALGAIGAGDLGKHFPDTDEAFKDADSKHLLSQAWQLVKNAGYTLGNVDCTVMAQKPKLAPYIEAMRKQIAELLETD 124
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_XYLFA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Xylella fastidiosa GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.232e-31 Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADP 679 L R+G G+D+H PG +++GG+ VPH G AHSDGDV+LH + DA+LGALGL DIGQ FP SD +WKGA S VF++ L+ E + +GN+DAT I + PK++PY +R ++ LL P Sbjct: 13 LNVRIGQGYDVHAFGPGDHVMLGGVRVPHRCGVLAHSDGDVILHALCDAMLGALGLGDIGQHFPPSDVRWKGADSGVFVRHCHLLLRERDWCVGNVDATAICESPKIAPYVNAMREGIARLLEVQP 138
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BACSU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus subtilis GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.232e-31 Identity = 63/123 (51.22%), Postives = 87/123 (70.73%), Query Frame = 2 Query: 308 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 676 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S ++ ++ + GY +GN+D T+I Q+PK+ PY E +R ++E L AD Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEAD 124
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BACA2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.232e-31 Identity = 62/123 (50.41%), Postives = 87/123 (70.73%), Query Frame = 2 Query: 308 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 676 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA G DIG+ FPD+DP++K A S ++ ++ E GY +GN+D T+I Q+PK++P+ + +R ++E L AD Sbjct: 2 FRIGQGFDVHQLTEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAAGEGDIGKHFPDTDPEFKDADSFKLLQHVWNIVKEKGYVLGNIDCTIIAQKPKMAPHIDAMRKRIAEGLEAD 124
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_ACAM1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.232e-31 Identity = 57/125 (45.60%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPL 685 R+G+G+D+H+L G PLI+GG+ + H G + HSD DVL H ++DA+LGAL L DIG FP +DPKW GA S +++ +L+ + G++IGN+D+ ++ +RPKL P+ E +R +S++L P L Sbjct: 5 RIGNGYDIHQLVEGRPLILGGVQIEHSLGLKGHSDADVLTHAIMDALLGALSLGDIGHYFPPTDPKWAGADSLKLLEQVHQLILDRGWQIGNIDSVVVAERPKLKPHIEAMRDRISQVLNLSPEL 129
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPDF_NOVAD (Bifunctional enzyme ispD/ispF OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ispDF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.232e-31 Identity = 62/125 (49.60%), Postives = 82/125 (65.60%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPPL 685 R G GFD+HRL G L + G+N+PH +G HSD DV +H +VDA+LGA+ DIG FP SDP+WKGA S F+ A L+ EAGY I N+D T+I + PK+ P+K +R L+ +LG D L Sbjct: 231 RTGMGFDVHRLVEGEELWLCGVNIPHGKGLSGHSDADVAIHALVDALLGAIAAGDIGDHFPPSDPQWKGASSDRFLAHAGTLVTEAGYRIANVDVTIICEAPKIGPHKAAMRETLARILGIDSAL 355
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_VIBVY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 61/122 (50.00%), Postives = 85/122 (69.67%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 676 R+GHGFD+H+ P+IIGG+ VP+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + E GY++GN D T+I Q PK++PY + +R ++ L D Sbjct: 3 RIGHGFDVHKFGGEGPVIIGGVAVPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKEQGYKLGNADVTIIAQAPKMAPYIDAMREAIAHDLETD 124
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_SHEHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 63/125 (50.40%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 676 + R+GHGFD+H+ PLI+GG++VP+E G AHSDGDV LH + DAILGA+ L DIG+ FPD+DP++KGA S V ++ +L + G+ + NLD T+I Q PK++P+ E IR L+ L AD Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGVDVPYEVGLIAHSDGDVALHAISDAILGAMALGDIGKHFPDTDPEFKGADSRVLLRHCYQLATDMGFSLSNLDVTIIAQAPKMAPHIEAIRKVLAADLVAD 125 The following BLAST results are available for this feature:
BLAST of FC921244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921244 ID=FC921244; Name=FC921244; organism=Citrus clementina; type=EST; length=748bpback to top |