FC921244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_PHOLL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Photorhabdus luminescens subsp. laumondii GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSE 661 R+GHGFD+H+ P+IIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KG S ++EA + E GY IGNLD T+I Q PK+ P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGGEGPIIIGGVRIPYEQGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGVDSRKLLREAYSRIREKGYRIGNLDITIIAQAPKMLPHIPQMRVNLAE 118
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURPS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei GN=ispF PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURP6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei (strain 668) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURP1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei (strain 1710b) GN=ispF PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURP0 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei (strain 1106a) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURMS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain SAVP1) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURMA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURM9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain NCTC 10229) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPF_BURM7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain NCTC 10247) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 302 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 658 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of FC921244 vs. ExPASy Swiss-Prot
Match: ISPDF_SILST (Bifunctional enzyme ispD/ispF OS=Silicibacter sp. (strain TM1040) GN=ispDF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.075e-30 Identity = 57/122 (46.72%), Postives = 85/122 (69.67%), Query Frame = 2 Query: 311 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 676 R+G+G+D+HR PG +++ G+ VPHERG + HSD DV +H V DA+ GA+ DIG+ FP SDP+WKGA S +F++ AV L G+ I N+D TL+ + PK+ P+ E +R ++E++G D Sbjct: 227 RLGNGYDVHRFGPGDHVMLCGVQVPHERGLQGHSDADVGMHAVTDALYGAMAEGDIGRHFPPSDPQWKGAASDIFLRHAVELARSKGFTINNVDCTLVCEYPKVGPHAEAMRARMAEIMGMD 348 The following BLAST results are available for this feature:
BLAST of FC921244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921244 ID=FC921244; Name=FC921244; organism=Citrus clementina; type=EST; length=748bpback to top |