FC921245
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA2_CHLRE (Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.298e-31 Identity = 76/186 (40.86%), Postives = 102/186 (54.84%), Query Frame = 3 Query: 153 AEYIWIGGS------GM---DMRSKARTLPGPVS-DPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPG 680 AEYIW G+ GM +MRSK + P+ D S+ P W++DGSSTGQA G +S+ IL P + DP R ++LVMC+ + P G+P TN R +I V AE+ WYG EQEYT+L K A+ A+GR + ++H +AC+ AG+ ISGIN EVMPG Sbjct: 37 AEYIWADGNEGKPEKGMIFNEMRSKTKCFEAPLGLDASEYPDWSFDGSSTGQAEGNNSDCILRPVRVVTDPIRGAPHVLVMCEVFAPDGKPHSTNTRAKLREIID-DKVTAEDCWYGFEQEYTMLAKTSGHIYGWPAGGFPAPQGPFYCGVGAESAFGRPLAEAHMEACMKAGLVISGINAEVMPG 221
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.352e-28 Identity = 72/178 (40.45%), Postives = 96/178 (53.93%), Query Frame = 3 Query: 153 AEYIWIGGSG--MDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPG 680 AEYIWI G+ +RSK + + G + LP W +DGSST QA G S+ +L P DP R G++ILV+C+ P +N R A A++ A+EP +GIEQEYT Q +PL AD+ +GRD+V++H CL AG+ ISGIN EVMPG Sbjct: 5 AEYIWIDGTEPTAKLRSKTKIITGQPAGLDALPIWGFDGSSTNQAEGHSSDCVLKPVFTCPDPIRGGDDILVLCEVLNIDLTPHASNTRAALAEVAER--FAAQEPIFGIEQEYTFFQDG--YPLGFPKGGFPAPQGGYYCGVGADEIFGRDVVEAHLDNCLKAGLAISGINAEVMPG 178
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.143e-25 Identity = 73/181 (40.33%), Postives = 97/181 (53.59%), Query Frame = 3 Query: 147 IIAEYIWIGGSG--MDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPL-XXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPG 680 I AEYIWI G+ +RSK + L SD S+LP+W +DGSST QA G S+++L P DP R G+++LV+C+ P P+N R + +EP +GIEQEYT L+ D PL AD +GR+IV+ H CL AG+ +SGIN EVMPG Sbjct: 3 IKAEYIWIDGTQPTAKLRSKTKIL----SDGSRLPRWGFDGSSTNQAEGHASDLVLEPVFSCPDPIRGGDHLLVLCEVLHTDLTPHPSNTRALLRPVAER--FAGQEPIFGIEQEYTFLKGD--RPLGFPEGGGYPAPQADYYCGVGADAIFGREIVEKHLDLCLAAGLGLSGINAEVMPG 175
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 71/179 (39.66%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 153 AEYIWIGGSGMD--MRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFS-HSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPG 680 AEYIWI G+ + MRSK R + D + W +DGSST QAPG +S+ +L P DP R G+N LV+C+ P PTN R AA + ++D+ P +GIEQEYT KD + P K GR IV+ H +ACL AG+ I G N EVM G Sbjct: 5 AEYIWIDGTEPEPLMRSKTRI----IKDGKEPEIWGFDGSSTNQAPGSNSDCVLRPVFETPDPIRGGDNRLVLCEVQLTDFTP-PTNTRAAALGVAERYADM---SPMFGIEQEYTFF-KDGR-PYGWPEVGYPAPQGPYYCGVGGSKMPGRQIVERHTQACLDAGLAIEGTNAEVMMG 173
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 64/181 (35.36%), Postives = 85/181 (46.96%), Query Frame = 3 Query: 156 EYIWIGGSGMDMRSKART-LPGPVSDPS--KLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPG 680 EYIW+ G + +T + S P+ +LP W +DGSST QA G S+ +L P A+F D R N +LVMC+ P G+ P +NKR A I + W+G EQEY + + + +P D A R IV+ H CL AGIN GIN EV G Sbjct: 7 EYIWLDGYTPTPNLRGKTQIKEFASFPTLEQLPLWGFDGSSTQQAEGHSSDCVLKPVAVFPDA-ARTNGVLVMCEVMMPDGKTPHASNKR---ATILDDAGA-----WFGFEQEYFFYKDGRPLGFPTSGYPAPQGPYYTGVGFSNVGDVA--RKIVEEHLDLCLAAGINHEGINAEVAKG 176
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA_DUNSA (Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15 Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 453 AEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMP 677 A+EPW+GIEQEYTLL KWPL A ++ GRDI + HY+ CL+AGI ISG+NGEV+P Sbjct: 2 AQEPWFGIEQEYTLLNSVTKWPLGWPKGGYPAGQGPYYCSVGAGRSIGRDIPEVHYRCCLHAGIQISGVNGEVLP 76
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 63/183 (34.43%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 144 KIIAEYIWIGGSGMDMRSKARTLPGPVSD---PSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKA-WGRDIVDSHYKACLYAGINISGINGEVMPG 680 K EYIW+ G + +T + +LP W +DGSST QA G S+ +L P AI+ DP R N LVMC+ P G +N R A I E+ W+G EQEY Q PL ++ R+IV+ H CL AGIN GIN EV G Sbjct: 3 KFKLEYIWLDGYTPVPNLRGKTQIKEFDEFPTLEQLPLWGFDGSSTMQAEG-SSDCVLKPVAIYPDP-ARTNGALVMCEVMMPDGHAHASNAR---ATILDD-----EDAWFGFEQEYFFYQNG--RPLGFPEQGYPAPQPYYTGVGYSNVGDVAREIVEEHLDLCLAAGINHEGINAEVAKG 173
BLAST of FC921245 vs. ExPASy Swiss-Prot
Match: GLNA2_RHIME (Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 61/186 (32.80%), Postives = 78/186 (41.94%), Query Frame = 3 Query: 156 EYIWIGGSGMDMRSKARTLPGPVSDPS--------KLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPG 680 EYIW+ D +TL G +LP W +DGSST QA G S+ +L P ++ DP R N LVMC+ P E P +N R + E W+G EQEY + + + +P D A R IV+ H CL AGIN GIN EV G Sbjct: 7 EYIWL-----DATRPYQTLRGKTQIKEFDAFPTLEQLPLWGFDGSSTLQAEGRTSDCVLKPVTVYPDPVRT-NGALVMCEVMMPDAETPHASNTRATV--------LDDEGAWFGFEQEYFFYKNGRPLGFPEQGYPAPQGPYYTGVGYKNVGDVA--RQIVEEHLDICLAAGINHEGINAEVAKG 176 The following BLAST results are available for this feature:
BLAST of FC921245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921245 ID=FC921245; Name=FC921245; organism=Citrus clementina; type=EST; length=680bpback to top |