FC921249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 3.540e-68 Identity = 121/207 (58.45%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K++PAL G T+++KPAEQTPL ALY L K AG P GV+N++PG+GPTAGAAIASH+ IDK++FTGST+VG+ + +AA SNLK V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR++V+E IY+EF K+ VE+AK +VG PFDP QGPQ+DKKQ+++IL I+ G EGA L Sbjct: 179 VCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKL 385
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 4.623e-68 Identity = 124/207 (59.90%), Postives = 161/207 (77.78%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWN P +F K+ AL+ G T+IVKPAEQTPL ALY A L K AG P GV+NVVPG+G TAGAAI+SHMDIDKVSFTGST+VG+ + +AA SNLK V+LELGGKSP ++F D D+++A + A G+ F++G+ICVA+SR++V+E IYDEF ++ VE+AK +V+G+P D + QGPQ+DK+Q +IL IE GK+EGA L Sbjct: 162 VCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLDSGISQGPQIDKEQHAKILDLIESGKKEGAKL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 4.623e-68 Identity = 120/207 (57.97%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K++PAL G T+++KPAEQTPL ALY L K AG P GV+N++PG+GPTAGAAIASH+ IDK++FTGST+VG+ + +AA SNLK V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR++V+E IY+EF K+ VE+AK +VG PFDP QGPQ+DKKQ++++L I+ G EGA L Sbjct: 179 VCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKVLELIQSGVAEGAKL 385
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3) HSP 1 Score: 257.299 bits (656), Expect = 4.623e-68 Identity = 121/207 (58.45%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K++PAL G T+++KPAEQTPL ALY L K AG P GV+N++PG+GPTAGAAIASH+ IDK++FTGST+VG+ + +AA SNLK V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR++V+E IY+EF ++ VE+AK VVG PFDP QGPQ+DKKQ+++IL I+ G EGA L Sbjct: 179 VCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKL 385
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 7.886e-68 Identity = 120/207 (57.97%), Postives = 163/207 (78.74%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWN P +F K+ PAL+ G T++VKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAG AI+SHMDIDKVSFTGST+VG+ + +AA SNLK V+LELGGKSP ++F D D+++A + A G+ F++G+ICVA+SR++V+E IYDEF ++ VE+AK +++G+P + + QGPQ+DK+Q ++IL IE GK+EGA L Sbjct: 162 VCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKL 368
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 1.757e-67 Identity = 121/207 (58.45%), Postives = 155/207 (74.88%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K++PAL G T+++KPAEQTPL ALY L K AG P GV+N++PGFGP GAAIASH+ IDK++FTGST+VG+ + +AA SNLK V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR+YV+E IY+EF ++ VE+AK VVG PFDP QGPQ+DKKQ+++IL I+ G EGA L Sbjct: 179 VCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKL 385
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 2.997e-67 Identity = 120/207 (57.97%), Postives = 155/207 (74.88%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP MF K++PAL G T+++KPAEQTPL ALY L K AG P GV+N++PGFGP GAAIASH+ IDK++FTGST+VG+ + +AA SNLK V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR+YV+E IY+EF +K V++AK +VG PFDP QGPQ+DKKQ+++IL I+ G EGA L Sbjct: 179 VCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRKSVKRAKRKIVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKL 385
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 6.676e-67 Identity = 126/207 (60.87%), Postives = 155/207 (74.88%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621 V G IIPWNFP M+ K+ PA+AAG T+++K AEQTPL ALY A L K AG P GV+NV+ GFG TAGAAI+SHMDIDKV+FTGST VGR ++QAAA SNLK V+LELGGKSP ++FDD D++ A A GI FN G+ C A SR+ VQEGIYD+F + E+A+ VG+PF+ QGPQV + QFDRI+ YI HGK+ GAT+ Sbjct: 157 VCGQIIPWNFPLLMWSWKIGPAVAAGNTVVLKTAEQTPLSALYAAKLIKEAGFPAGVINVISGFGRTAGAAISSHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFDDADIDNAISWANFGIFFNHGQCCCAGSRILVQEGIYDKFVARFKERAQKNKVGNPFEQDTFQGPQVSQLQFDRIMEYINHGKKAGATV 363
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 5.652e-66 Identity = 124/208 (59.62%), Postives = 154/208 (74.04%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624 V G IIPWNFP M K+ PALA G +++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL Sbjct: 178 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 385
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2) HSP 1 Score: 250.366 bits (638), Expect = 5.652e-66 Identity = 124/208 (59.62%), Postives = 154/208 (74.04%), Query Frame = 1 Query: 1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624 V G IIPWNFP M K+ PALA G +++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR + AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL Sbjct: 178 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 385 The following BLAST results are available for this feature:
BLAST of FC921249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921249 ID=FC921249; Name=FC921249; organism=Citrus clementina; type=EST; length=626bpback to top |