FC921249

Overview
NameFC921249
Unique NameFC921249
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length626
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.663e-65
Identity = 122/208 (58.65%), Postives = 154/208 (74.04%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K+ PALA G  +++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST+VG  +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE +YDEF ++ V +AK+ VVG+PFD    QGPQVD+ QF +IL YI+ G++EGA LL
Sbjct:  180 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLL 387          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.663e-65
Identity = 122/208 (58.65%), Postives = 154/208 (74.04%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K+ PALA G  +++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST+VG  +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE +YDEF ++ V +AK+ VVG+PFD    QGPQVD+ QF +IL YI+ G++EGA LL
Sbjct:  161 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLL 368          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 8.161e-65
Identity = 119/207 (57.49%), Postives = 153/207 (73.91%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G I PWNFP  M   K++PAL  G TM++KPAEQTPL ALY   L K AG P GV+N+VPGFGPT GAAI+SH  I+K++FTGST+VG+ V +AA+ SNLK V+LELGGK+P ++  D D++ A + A  G+ FN+G+ C A+SRV+V+E +Y EF ++ VE AK   VGDPFD    QGPQ+D+KQFD+IL  IE GK+EGA L
Sbjct:  173 VCGAITPWNFPLLMLVWKLAPALCCGNTMVLKPAEQTPLTALYLGSLIKEAGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQFDKILELIESGKKEGAKL 379          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.818e-64
Identity = 121/208 (58.17%), Postives = 153/208 (73.56%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K+ PALA G  +++K AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH  +DKV+FTGST+VG  +  AA +SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE +YDEF ++ V +AK+ VVG+PFD    QGPQVD+ QF +IL YI+ G++EGA LL
Sbjct:  180 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKSGQQEGAKLL 387          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.818e-64
Identity = 122/208 (58.65%), Postives = 152/208 (73.08%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K+ PALA G  +++K AEQTPL ALY A+L K AG P GV+NVVPGFGPTAGAAIASH D+DKV+FTGST+VG  +  AA  SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE +Y EF ++ V +AK+ VVG+PFD    QGPQVD+ QF+++L YI+ GK EGA LL
Sbjct:  161 VCGQIIPWNFPLLMQAAKLGPALATGNVVVMKVAEQTPLTALYVANLTKEAGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGRSNLKKVTLELGGKSPNIIVSDADMDWAVEQAHFALFFNQGQCCGAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFNKVLGYIKSGKEEGAKLL 368          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 2.374e-64
Identity = 122/208 (58.65%), Postives = 151/208 (72.60%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K+ PALA G  +++K AEQTPL ALY A+L K AG P GV+NV+PGFGPTAGAAIASH D+DKV+FTGST+VG  +  AA  SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE IY EF ++ V +AK+ VVG+PFD    QGPQVD+ QF ++L YI+ GK EGA LL
Sbjct:  181 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLL 388          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 4.050e-64
Identity = 121/207 (58.45%), Postives = 151/207 (72.95%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G IIPWNFP  M+  K+ PA+A G T+++K AEQTPL  L  A L K AG P GV+NV+ GFG  AGAA++SHMD+DKV+FTGST VGR +++AAA+SNLK V+LELGGKSP ++F+D D++ A      GI FN G+ C A SRVYVQE IYD+F +K  E+A+  VVGDPF     QGPQV K QFDRI+ YI+ GK  GAT+
Sbjct:  156 VCGQIIPWNFPLLMWAWKIGPAIACGNTVVLKTAEQTPLGGLVAASLVKEAGFPPGVINVISGFGKVAGAALSSHMDVDKVAFTGSTVVGRTILKAAASSNLKKVTLELGGKSPNIVFEDADIDNAISWVNFGIFFNHGQCCCAGSRVYVQESIYDKFVQKFKERAQKNVVGDPFAADTFQGPQVSKVQFDRIMEYIQAGKDAGATV 362          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.050e-64
Identity = 118/207 (57.00%), Postives = 153/207 (73.91%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G I PWNFP  M   K++PAL  G T+++KPAEQTPL ALY A L K  G P GV+N+VPGFGPT GAAI+SH  I+K++FTGST+VG+ V +AA+ SNLK V+LELGGK+P ++  D D++ A + A  G+ FN+G+ C A+SRV+V+E +Y EF ++ VE AK   VGDPFD    QGPQ+D+KQFD+IL  IE GK+EGA L
Sbjct:  173 VCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKL 379          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.290e-64
Identity = 120/207 (57.97%), Postives = 152/207 (73.43%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G IIPWNFP  M+  K+ PA+A G T+++K AEQTPL  LY A++ K AG+P GV+NV+ GFG  AG+AI+ HMDIDKV+FTGST VGR ++QAAA SNLK V+LELGGKSP ++F+D D++ A   A  GI +N G+ C A SR+ VQEGIYD+F  +L E+A    VGDPF     QGPQV + QFDRI+ YI+HGK  GAT+
Sbjct:  158 VCGQIIPWNFPLLMWAWKIGPAIATGNTVVIKTAEQTPLSGLYAANVIKEAGIPAGVVNVISGFGRVAGSAISHHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFNDADIDNAISWANFGIFYNHGQCCCAGSRILVQEGIYDKFIARLKERALQNKVGDPFAKDTFQGPQVSQLQFDRIMEYIQHGKDAGATV 364          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.290e-64
Identity = 114/207 (55.07%), Postives = 156/207 (75.36%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G I PWN P  +   K+ PAL  G T+IVKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AAA SNLK V+LELG K+P ++F D D+++A + A  G+  N+G+ C+A+S+++V+E IYDEF ++ VE+AK +V G+P  P V  GPQ++K Q ++I+  IE GK+EGA L
Sbjct:  162 VCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEETIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKL 368          
The following BLAST results are available for this feature:
BLAST of FC921249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH2_RAT3.663e-6558.65Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_MESAU3.663e-6558.65Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]
AL1A3_HUMAN8.161e-6557.49Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH2_MOUSE1.818e-6458.17Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_HORSE1.818e-6458.65Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
ALDH2_BOVIN2.374e-6458.65Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH_CLAHE4.050e-6458.45Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
AL1A3_MOUSE4.050e-6457.00Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
ALDH_ASPNG5.290e-6457.97Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALDH1_MACPR5.290e-6455.07Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]

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Properties
Property NameValue
Genbank descriptionC32102H03EF RVDevelopN Citrus clementina cDNA clone C32102H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921249 ID=FC921249; Name=FC921249; organism=Citrus clementina; type=EST; length=626bp
GTTGTTGGACACATCATTCCCTGGAATTTTCCTACCACCATGTTTTTCAT
GAAGGTTAGCCCTGCGTTAGCCGCTGGGTGCACAATGATTGTCAAGCCTG
CTGAGCAAACTCCCCTTATTGCTCTTTATTTTGCCCATCTTGCCAAGCTG
GCTGGAGTACCTGATGGAGTGCTTAATGTTGTACCTGGATTTGGACCAAC
TGCTGGTGCTGCCATCGCCTCCCATATGGACATTGATAAAGTTAGTTTTA
CAGGGTCTACGGATGTCGGACGTCAAGTGATGCAGGCCGCAGCAACAAGC
AACTTGAAGCCAGTTTCACTAGAATTAGGTGGCAAGTCGCCTCTCTTGAT
TTTTGATGATGTTGATGTAAACACAGCTGCAGACATGGCGCTTCTGGGCA
TCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCTCGTGTTTATGTC
CAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGTCGAAAAGGCAAA
AGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTCGTCAAGGACCCC
AGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTACATTGAGCATGGC
AAGAGGGAAGGAGCCACATTGTTAAC
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