FC921249

Overview
NameFC921249
Unique NameFC921249
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length626
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.909e-64
Identity = 114/207 (55.07%), Postives = 156/207 (75.36%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G I PWN P  +   K+ PAL  G T+IVKPAEQTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AAA SNLK V+LELG K+P ++F D D+++A + A  G+  N+G+ C+A+S+++V+E IYDEF ++ VE+AK +V G+P  P V  GPQ++K Q ++I+  IE GK+EGA L
Sbjct:  162 VCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKL 368          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 9.023e-64
Identity = 115/207 (55.56%), Postives = 149/207 (71.98%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G IIPWNFP  MF  KV PALA G T+++K AEQTPL A Y   L   AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++  AA SNLKPV+LELGGKSP ++F+D D++ A ++A   + FN+G+ C A SR +V E +YDEF +K   +A   VVGDPF   + QGPQ+D KQF++++ YI+ G    ATL
Sbjct:  198 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATL 404          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 9.023e-64
Identity = 117/207 (56.52%), Postives = 153/207 (73.91%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G I PWNFP  M   K++PAL  G T+++KPAEQTPL ALY A L K  G P GV+N+VPGFGPT GAAI+SH  I+K++FTGST+VG+ V +AA+ SNLK V+LELGG++P ++  D D++ A + A  G+ FN+G+ C A+SRV+V+E +Y EF ++ VE AK   VGDPFD    QGPQ+D+KQFD+IL  IE GK+EGA L
Sbjct:  173 VCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGRNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKL 379          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.010e-63
Identity = 117/207 (56.52%), Postives = 150/207 (72.46%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G IIPWNFP  M   K+ PALA G T+++K AEQTPL AL    L   AG+PDGV+N+V GFG TAGAAIASHMD+DKV+FTGSTDVG+ +++ A+ SNLK V+LELGGKSP ++ +D DV+ A ++A   + FN+G+ C A SR +V E +YDEF +K   +A    VGDPF   + QGPQVD +QF++IL YI+HG   GATL
Sbjct:  194 VAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATL 400          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.625e-63
Identity = 119/208 (57.21%), Postives = 151/208 (72.60%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K+ PALA G  +++K +EQTPL ALY A+L K AG P GV+N+VPG+GPTAGAAIASH D+DKV+FTGST+VG  +  AA  SNLK V+LELGGKSP +I  D D++ A + A   + FN+G+ C A SR +VQE IY EF ++ V +A++ VVG+PFD    QGPQ+D+ QF +IL YI+ GK EGA LL
Sbjct:  182 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLL 389          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.625e-63
Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K++PALA G T+++K AEQTPL ALY A L K AG P GV+N++ G+GPTAGAAIA HMD+DKV+FTGST+VG  + +AA  SNLK V+LELGGKSP ++  D D+  A +     + FN G+ C A SR +V+E IY+EF ++ VEKAK   VG+PF+   +QGPQVDK+QF+R+L YI+ G++EGA LL
Sbjct:  178 VCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLL 385          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1B1_MOUSE (Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.625e-63
Identity = 120/208 (57.69%), Postives = 151/208 (72.60%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K++PALA G T+++K AEQTPL ALY A L K AG P GV+N++ G+GPTAGAAIA HMD+DKV+FTGST+VG  + +AA  SNLK V+LELGGKSP ++  D D+  A D     + FN G+ C A SR +V+E IY EF ++ VEKAK   VG+PF+   +QGPQVDK+QF+RIL YI  G++EGA LL
Sbjct:  180 VCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGESNLKRVTLELGGKSPSIVLADADMEHAVDQCHEALFFNMGQCCCAGSRTFVEESIYREFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERILGYIRLGQKEGAKLL 387          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 2.625e-63
Identity = 118/208 (56.73%), Postives = 153/208 (73.56%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K++PALA G T+++K AEQTPL ALY A L K AG P GV+N++ G+GPTAGAAIA HMD+DKV+FTGST+VG  + +AA  SNLK V+LELGGKSP ++  D D+  A +     + FN G+ C A SR +V+E IY+EF ++ VEKAK   VG+PF+   +QGPQVDK+QF+R+L YI+ G++EGA LL
Sbjct:  178 VCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLL 385          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.429e-63
Identity = 119/208 (57.21%), Postives = 152/208 (73.08%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K++PALA G T+++K AEQTPL ALY A L K AG P GV+N++ G+GPTAGAAIA HMD+DKV+FTGST+VG  + +AA  SNLK V+LELGGKSP ++  D D++ A D     + FN G+ C A SR +V+E IY EF ++ VEKAK   VG+PF+   +QGPQVDK+QF++IL YI  G++EGA LL
Sbjct:  180 VCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKEGAKLL 387          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 9.976e-63
Identity = 115/207 (55.56%), Postives = 152/207 (73.43%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            VVG I PWNFP  +   K++PA+AAGCT+++KPAEQTPL ALY A L K AG P GV+N+VPG G TAGAA+ +H DI+K++FTGST+VG+ ++Q +  +NLK V+LELGGKSP +IF D D++ A +++   I+ N G++C A SR +V E IY+EF ++ VE+AK   VGDPFDP    GPQVD+ Q  +IL  IE GK EGA L
Sbjct:  159 VVGAITPWNFPLHLAASKIAPAIAAGCTLVLKPAEQTPLTALYLASLVKQAGFPAGVINIVPGLGHTAGAALTNHPDINKITFTGSTEVGQLIIQGSGKTNLKRVTLELGGKSPNIIFPDSDLDYAVEVSHQAIMANMGQVCCAGSRTFVHEDIYEEFVRRSVERAKKRTVGDPFDPKNENGPQVDETQLKKILELIESGKTEGAKL 365          
The following BLAST results are available for this feature:
BLAST of FC921249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH1_ELEED6.909e-6455.07Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
AL2B4_ARATH9.023e-6455.56Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL1A3_RAT9.023e-6456.52Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
AL2B7_ARATH2.010e-6356.52Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
ALDH2_PIG2.625e-6357.21Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
AL1B1_PONAB2.625e-6356.73Aldehyde dehydrogenase X, mitochondrial OS=Pongo a... [more]
AL1B1_MOUSE2.625e-6357.69Aldehyde dehydrogenase X, mitochondrial OS=Mus mus... [more]
AL1B1_HUMAN2.625e-6356.73Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
AL1B1_RAT3.429e-6357.21Aldehyde dehydrogenase X, mitochondrial OS=Rattus ... [more]
ALDH_ENCBU9.976e-6355.56Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN... [more]

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Properties
Property NameValue
Genbank descriptionC32102H03EF RVDevelopN Citrus clementina cDNA clone C32102H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921249 ID=FC921249; Name=FC921249; organism=Citrus clementina; type=EST; length=626bp
GTTGTTGGACACATCATTCCCTGGAATTTTCCTACCACCATGTTTTTCAT
GAAGGTTAGCCCTGCGTTAGCCGCTGGGTGCACAATGATTGTCAAGCCTG
CTGAGCAAACTCCCCTTATTGCTCTTTATTTTGCCCATCTTGCCAAGCTG
GCTGGAGTACCTGATGGAGTGCTTAATGTTGTACCTGGATTTGGACCAAC
TGCTGGTGCTGCCATCGCCTCCCATATGGACATTGATAAAGTTAGTTTTA
CAGGGTCTACGGATGTCGGACGTCAAGTGATGCAGGCCGCAGCAACAAGC
AACTTGAAGCCAGTTTCACTAGAATTAGGTGGCAAGTCGCCTCTCTTGAT
TTTTGATGATGTTGATGTAAACACAGCTGCAGACATGGCGCTTCTGGGCA
TCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCTCGTGTTTATGTC
CAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGTCGAAAAGGCAAA
AGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTCGTCAAGGACCCC
AGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTACATTGAGCATGGC
AAGAGGGAAGGAGCCACATTGTTAAC
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