FC921249

Overview
NameFC921249
Unique NameFC921249
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length626
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH9_POLMI (Aldehyde dehydrogenase 9 (Fragment) OS=Polyandrocarpa misakiensis GN=ALDH9 PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 6.466e-62
Identity = 117/199 (58.79%), Postives = 146/199 (73.37%), Query Frame = 1
Query:   28 FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            FP  M   K+ PALA G T+++K AEQTPL ALY A LAK AG P GV+N++ G+GPTAGAAI+ HMD+DKV+FTGST+    VM+AAA SNLK VSLELGGKSP+++  D D++ A D    G+ FN G+ C A SR+YVQEG+YDEF KK VE+AK   VGDPF   + QGPQ+D +QF++I   IE GK+ GA LL
Sbjct:    1 FPLLMQAWKLGPALACGNTVVMKTAEQTPLTALYVAALAKEAGFPPGVINIISGYGPTAGAAISEHMDVDKVAFTGSTETAHIVMEAAAKSNLKRVSLELGGKSPMIVLADSDLDFAVDTCHHGLFFNMGQCCCAGSRIYVQEGVYDEFVKKSVERAKKRTVGDPFTEGIEQGPQIDTEQFNKINRMIEEGKQSGAKLL 199          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 8.445e-62
Identity = 117/207 (56.52%), Postives = 151/207 (72.95%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            VVG IIPWNFP  M   K+ PALA G  +++KP+E TPL AL    L + AG P GV+NVV G+G T G AI+SHM IDKV+FTGST VGR+VM+AAA SNLK V+LELGGKSP++IFDD D+  + +    G+ +N G+ C A +R++VQEGIYD+F +K  +K K   +GDPF   + QGPQV + Q+DRI+SYIE G+ EGAT+
Sbjct:  162 VVGQIIPWNFPLLMLAWKIGPALATGNCIVLKPSEFTPLSALRMCALIQEAGFPPGVVNVVTGYGSTTGQAISSHMKIDKVAFTGSTLVGRKVMEAAAKSNLKNVTLELGGKSPVVIFDDADLEQSVNWTAHGLFWNHGQACCAGTRIFVQEGIYDKFLQKFTDKIKEIKLGDPFGLGIDQGPQVSQIQYDRIMSYIESGRAEGATV 368          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.441e-61
Identity = 116/208 (55.77%), Postives = 148/208 (71.15%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M   K+SPALA G T+++KPAEQTPL A+    +   AG PDGVLN++PGFG TAG+ IA HMD+DK++FTGST VG QVMQ AA +NLK VSLELGGKS L++ +D D+  AA++A   + FN G++C ASSR+YV E +YDEF  +L + A+A  VG   D     GP V KKQ +R+L YIE G + GAT++
Sbjct:  158 VCGQIIPWNFPLLMAAFKLSPALAMGNTVVLKPAEQTPLTAVRLGEMVMEAGYPDGVLNILPGFGATAGSEIARHMDVDKIAFTGSTAVGHQVMQMAAETNLKKVSLELGGKSALIVCEDADLEEAAEVATTRVYFNTGQVCTASSRIYVHESVYDEFVSRLRKNAEARKVGPGNDTGNNMGPLVSKKQHERVLGYIEDGVKAGATVV 365          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.209e-61
Identity = 116/207 (56.04%), Postives = 148/207 (71.50%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G IIPWNFP  M+  K+ PA+A G T+++K AEQTPL A     L + AG P GV+NV+ GFG  AGAA+++HMDIDK++FTGST VGRQ+M++AA SNLK V+LELGGKSP ++F D D++ A      GI FN G+ C A SR+YVQE IYD+F ++  E+A    VGDPF     QGPQV + QFDRI+ YIE GK+ GAT+
Sbjct:  157 VCGQIIPWNFPILMWSWKIGPAIATGNTVVLKTAEQTPLSAYIACKLIQEAGFPPGVINVITGFGKIAGAAMSAHMDIDKIAFTGSTVVGRQIMKSAAGSNLKKVTLELGGKSPNIVFADADLDEAIHWVNFGIYFNHGQACCAGSRIYVQEEIYDKFIQRFKERAAQNAVGDPFAADTFQGPQVSQLQFDRIMGYIEEGKKSGATI 363          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.348e-59
Identity = 118/207 (57.00%), Postives = 146/207 (70.53%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G IIPWNFP  M   K++PA+A G T+I+K AE TPL AL         G P GV+NV+ G G   G AI+SHMDIDKV+FTGST VGR VM+AAA+SNLK V+LELGGKSP ++F+D D+++AA     GI +N G++C A SRVYVQE +YDEF K++V KAK   VGDPF     QG QV K+Q++RI+SYIE G   GA L
Sbjct:  163 VCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVPECGFPPGVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRMVMRAAASSNLKKVTLELGGKSPNIVFNDADLDSAAVWTNYGIFYNSGQVCCAGSRVYVQEDVYDEFIKRMVAKAKTLKVGDPFAEDTFQGAQVSKQQYERIVSYIESGIAHGAKL 369          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDHY_YEAST (Aldehyde dehydrogenase 2, mitochondrial OS=Saccharomyces cerevisiae GN=ALD2 PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 8.740e-59
Identity = 115/208 (55.29%), Postives = 147/208 (70.67%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWN P  M+  K+ PALAAG T+++KP E TPL AL  A L K AG P GV+NVV G+GPTAGAA  SH D DK++FTGST VG+ VM+AAA SNLK V+LELGGKSP+++F D D++ A + A  G+ FN+G+ C+A SR+ V E IYDE  ++ +EKAK  V+G+PF+   R GPQ+ K +FD I   I   K EGA +L
Sbjct:  190 VCGEIIPWNIPLLMYIWKIGPALAAGNTVVLKPEELTPLTALTVATLIKEAGFPPGVVNVVSGYGPTAGAACLSHKDNDKLAFTGSTLVGKVVMKAAAKSNLKKVTLELGGKSPMIVFIDADLDWAVENAHFGVFFNQGQCCIAQSRITVHESIYDEIVERDLEKAKKQVLGNPFESDTRYGPQILKIEFDSIPRLINSAKAEGAKVL 397          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH2_YEAST (Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyces cerevisiae GN=ALD2 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 4.337e-58
Identity = 116/207 (56.04%), Postives = 141/207 (68.12%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-KAWVVG---DPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 609
            VV  I+PWN+P  M   K+  ALAAG T+I+KPAE T L  LYFA L K AG P GV+N+VPG+G   G A+ASHMDIDK+SFTGST VG  V++A+  SNLK V+LE GGKSP L+F+D D++ A D    GI +N G+ C A+SRVYVQ  IYD+F +K  E A K W V    DPFD     GP +   Q+DRI SYIE GKRE
Sbjct:  161 VVAQIVPWNYPLAMACWKLQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVGGFVLEASGQSNLKDVTLECGGKSPALVFEDADLDKAIDWIAAGIFYNSGQNCTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKRE 367          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH3_YEAST (Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyces cerevisiae GN=ALD3 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.398e-58
Identity = 113/207 (54.59%), Postives = 141/207 (68.12%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-KAWVVG---DPFDPAVRQGPQVDKKQFDRILSYIEHGKRE 609
            VV  I+PWN+P  M   K+  ALAAG T+I+KPAE T L  LYFA L K AG P GV+NV+PG+G   G A+ +HMDIDK+SFTGST VG  V++A+  SNLK ++LE GGKSP L+F+D D++ A +    GI FN G+IC A+SRVYVQ  IYD+F +K  E A K W V    DPFD     GP +   Q+DRI SYIE GK+E
Sbjct:  161 VVAQIVPWNYPLAMACRKMQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNVIPGYGSVVGKALGTHMDIDKISFTGSTKVGGSVLEASGQSNLKDITLECGGKSPALVFEDADLDKAIEWVANGIFFNSGQICTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKKE 367          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 5.302e-56
Identity = 109/204 (53.43%), Postives = 144/204 (70.59%), Query Frame = 1
Query:   13 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            IIPWNFP  M   K++ ALA G T++ K AEQTP  ALY A L K  G+P G++N+V G+GPTAGAAIA HMDI KV+FTGST VG  + +AA  S+LK V+LELGGKS  ++  D D++ A +     + FN G+ C   S  +++E IYDEF ++ VEKAK   VG+PFD   +QGPQVD+++F+RIL YI+ G++EGA LL
Sbjct:  176 IIPWNFPLVMQSWKLALALAMGNTVVTKVAEQTPFSALYLASLIKEVGLPPGLVNIVTGYGPTAGAAIAHHMDIGKVAFTGSTKVGHLIQKAAGNSSLKRVTLELGGKSLSIVLADADMDHAVEQRQEALFFNMGQCCCPGSWTFIEESIYDEFLERTVEKAKQRRVGNPFDLDTQQGPQVDRERFERILGYIQLGQKEGAKLL 379          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.631e-55
Identity = 103/204 (50.49%), Postives = 140/204 (68.63%), Query Frame = 1
Query:   13 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            IIPWN+P  M   K +  LAAG T+++KPA+ TPL AL FA L   AG P GV+N++PG G  AG  ++ H DI K+ FTGST VG+Q+M++ A SNLK VSLELGGKSPL+IF D D+  A  M +  + FNKGE C+A+ R++V+E I+DEF  ++VE+ K   +GDP D +   GPQ  +   +++L Y E G +EGATL+
Sbjct:  591 IIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVINIIPGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSNLKKVSLELGGKSPLIIFSDCDLEKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLV 794          
The following BLAST results are available for this feature:
BLAST of FC921249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH9_POLMI6.466e-6258.79Aldehyde dehydrogenase 9 (Fragment) OS=Polyandroca... [more]
ALDH_AGABI8.445e-6256.52Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
ALDH2_LEITA1.441e-6155.77Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
ALDH_ALTAL3.209e-6156.04Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
YF19_SCHPO1.348e-5957.00Putative aldehyde dehydrogenase-like protein C9E9.... [more]
ALDHY_YEAST8.740e-5955.29Aldehyde dehydrogenase 2, mitochondrial OS=Sacchar... [more]
ALDH2_YEAST4.337e-5856.04Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyce... [more]
ALDH3_YEAST7.398e-5854.59Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyce... [more]
AL1B1_BOVIN5.302e-5653.43Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
AL1L2_MOUSE2.631e-5550.49Probable 10-formyltetrahydrofolate dehydrogenase A... [more]

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Properties
Property NameValue
Genbank descriptionC32102H03EF RVDevelopN Citrus clementina cDNA clone C32102H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921249 ID=FC921249; Name=FC921249; organism=Citrus clementina; type=EST; length=626bp
GTTGTTGGACACATCATTCCCTGGAATTTTCCTACCACCATGTTTTTCAT
GAAGGTTAGCCCTGCGTTAGCCGCTGGGTGCACAATGATTGTCAAGCCTG
CTGAGCAAACTCCCCTTATTGCTCTTTATTTTGCCCATCTTGCCAAGCTG
GCTGGAGTACCTGATGGAGTGCTTAATGTTGTACCTGGATTTGGACCAAC
TGCTGGTGCTGCCATCGCCTCCCATATGGACATTGATAAAGTTAGTTTTA
CAGGGTCTACGGATGTCGGACGTCAAGTGATGCAGGCCGCAGCAACAAGC
AACTTGAAGCCAGTTTCACTAGAATTAGGTGGCAAGTCGCCTCTCTTGAT
TTTTGATGATGTTGATGTAAACACAGCTGCAGACATGGCGCTTCTGGGCA
TCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCTCGTGTTTATGTC
CAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGTCGAAAAGGCAAA
AGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTCGTCAAGGACCCC
AGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTACATTGAGCATGGC
AAGAGGGAAGGAGCCACATTGTTAAC
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