FC921249

Overview
NameFC921249
Unique NameFC921249
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length626
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 2.631e-55
Identity = 102/204 (50.00%), Postives = 143/204 (70.10%), Query Frame = 1
Query:   13 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            IIPWN+P  M   K +  LAAG T+++KPA+ TPL AL FA L+  AG P GV+N++PG G  AG  ++ H DI K+ FTGST +G+Q+M++ A SNLK VSLELGGKSPL+IF+D +++ A  M +  + FNKGE C+A+ R++V+E I+DEF  ++VE+ K   +GDP D +   GPQ  K   +++L Y E G +EGATL+
Sbjct:  591 IIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLV 794          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: FTHFD_HUMAN (10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 4.488e-55
Identity = 100/208 (48.08%), Postives = 142/208 (68.27%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWN+P  M   K +  LAAG T+++KPA+ TPL AL FA L   AG+P GV+NV+PG G   G  ++ H D+ K+ FTGST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A  M +  + FNKGE C+A+ R++V++ I+DEF +++VE+ +   VG+P D     GPQ       +++ Y +HG +EGATL+
Sbjct:  566 VCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLV 773          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.999e-55
Identity = 97/208 (46.63%), Postives = 142/208 (68.27%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G +IPWN+P  M   K +  L AG T+++KPA+ TPL AL FA L+  AG+P GV+N++PG G   G  ++ H D+ K+ FTGST +G+Q+M++ A SN+K VSLELGGKSPL+IF D D++ A  M +  + FNKGE C+A+ R++++E I+DEF K++VE+ K   +GDP D +   GPQ  K   D+++ Y + G +EG  L+
Sbjct:  566 VCGIVIPWNYPLMMLAWKTAACLTAGNTVVLKPAQVTPLTALKFAELSVKAGIPKGVINILPGAGSLIGQRLSDHPDVRKIGFTGSTPIGKQIMKSCAVSNVKKVSLELGGKSPLIIFHDCDLDKAVRMGMSSVFFNKGENCIAAGRLFLEESIHDEFVKRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGGKLV 773          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: FTHFD_PONAB (10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.999e-55
Identity = 100/208 (48.08%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWN+P  M   K +  LAAG T+++KPA+ TPL AL FA L   AG+P GV+NV+PG G   G  ++ H D+ K+ FTGST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A  M +  + FNKGE C+A+ R++V++ I+DEF +++VE+ +   VGDP D     GPQ       +++ Y + G +EGATL+
Sbjct:  566 VCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGDPLDRDTDHGPQNHHAHLMKLMEYCQRGVKEGATLV 773          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 2.228e-54
Identity = 104/207 (50.24%), Postives = 143/207 (69.08%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            + G IIPWN+P  M   K++PAL+ G  ++VKPAEQTPL ALY A L + AG P GV+NVVPG+G   G +I+SH+DI+KVSFTGST+VG+ VMQAA +SNLK  SLEL GK P+++F D D++ A   A      N G+   + SR YV E IY+EF K+ VE+A    +GDP++     GPQ+D++Q+ ++L YI+  + +GA L
Sbjct:  156 ICGLIIPWNYPMLMMTWKMAPALSCGNCIVVKPAEQTPLTALYCASLMEEAGFPPGVVNVVPGYGTICGQSISSHLDINKVSFTGSTEVGKLVMQAAGSSNLKRCSLELSGKCPVVVFPDTDLDFAVQQAHEAAFQNMGQCRWSGSRAYVHESIYEEFVKRSVEQATRRKIGDPYELDTEHGPQIDEEQYTKVLDYIKSAQEQGAKL 362          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.909e-54
Identity = 107/209 (51.20%), Postives = 146/209 (69.86%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G I+PWN+P  M   K++PALAAG  +I+K AE TPL  LYFA L + AG P GV+N++ G G  AG+ +A H  IDK++FTGST VG  V Q AA SNLK V+LE GGKSP L+F+D D++ A   A LGI++N G+IC ++SR+YVQ+ +YD+F +   +   + ++VG PFD     GP V+K Q++RI +YIE GK+EGA L+
Sbjct:  157 VCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAA-SNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLV 364          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 4.963e-54
Identity = 104/208 (50.00%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G IIPWNFP  M+  K++PAL  G T+++K AE TPL ALY +     AG+P GV+N+V GFG   G AI +H  I KV+FTGST  GR + Q+AA + LK V+LELGGKSP ++F D ++  A    +LGI +N GE+C A SRVYV+E IYD+F ++    +++  VGDPFD +  QG Q  + Q ++IL Y++ GK EGATL+
Sbjct:  184 VCGQIIPWNFPLLMWAWKIAPALVTGNTVVLKTAESTPLSALYVSKYIPQAGIPPGVINIVSGFGKIVGEAITNHPKIKKVAFTGSTATGRHIYQSAA-AGLKKVTLELGGKSPNIVFADAELKKAVQNIILGIYYNSGEVCCAGSRVYVEESIYDKFIEEFKAASESIKVGDPFDESTFQGAQTSQMQLNKILKYVDIGKNEGATLI 390          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 6.481e-54
Identity = 96/208 (46.15%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G +IPWN+P  M   K +  LAAG T+++KPA+ TPL AL FA L+  AG+P GV+N++PG G   G  ++ H D+ K+ FTGST +G+ +M++ A  N+K VSLELGGKSPL+IF D D++ A  M +  + FNKGE C+A+ R++++E I+DEF K++V + K   +GDP D +   GPQ  K   D+++ Y + G +EGA L+
Sbjct:  566 VCGIVIPWNYPLMMLAWKTAACLAAGNTVVLKPAQVTPLTALKFAELSVKAGIPKGVINILPGAGSLIGQRLSDHPDVRKIGFTGSTPIGKHIMKSCAVGNVKKVSLELGGKSPLIIFQDCDLDKAVRMGMSSVFFNKGENCIAAGRLFLEESIHDEFVKRVVGEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGAKLV 773          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.106e-53
Identity = 96/208 (46.15%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V G +IPWN+P  M   K +  LAAG T+++KPA+ TPL AL FA L   AG+P GV+N++PG G   G  ++ H D+ K+ FTGST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A  M +  + FNKGE C+A+ R++V++ I+D+F +K+VE+     +G+P D     GPQ  +    +++ Y + G +EGATL+
Sbjct:  566 VCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDQFVQKVVEEVGKMKIGNPLDRDTNHGPQNHEAHLRKLVEYCQRGVKEGATLV 773          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: CROM_OMMSL (Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 1.444e-53
Identity = 107/207 (51.69%), Postives = 140/207 (67.63%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 621
            V G +IP+N+P  M   K++PALA G  MIVKPAEQTPL ALY A L K AG P GV+NVVPGFG   G  I+SH +I+KVSFTGST+VG  VMQ A  SNLK  S++L GK PL++F+D +++ A   A      N G+   + SR YV E IYDEF K+ VEKA +   GDP++     GPQ+D++Q+ +I+ +I+ GK +GA L
Sbjct:  156 VCGLLIPYNYPMLMMTWKMAPALACGNCMIVKPAEQTPLTALYCASLIKEAGFPPGVVNVVPGFGKICGQYISSHQEINKVSFTGSTEVGMLVMQDAGKSNLKRCSMQLSGKCPLVVFEDTELDFAVQQAHEAAFQNMGQCRWSGSRTYVHENIYDEFVKRAVEKATSRKTGDPYEMDTEHGPQIDEEQYKKIMEFIKKGKDKGAQL 362          
The following BLAST results are available for this feature:
BLAST of FC921249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1L2_HUMAN2.631e-5550.00Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
FTHFD_HUMAN4.488e-5548.0810-formyltetrahydrofolate dehydrogenase OS=Homo sa... [more]
FTHFD_XENLA9.999e-5546.6310-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
FTHFD_PONAB9.999e-5548.0810-formyltetrahydrofolate dehydrogenase OS=Pongo a... [more]
CROM_ENTDO2.228e-5450.24Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=... [more]
YLX7_SCHPO2.909e-5451.20Putative aldehyde dehydrogenase-like protein C922.... [more]
ALDH4_YEAST4.963e-5450.00Potassium-activated aldehyde dehydrogenase, mitoch... [more]
FTHFD_XENTR6.481e-5446.1510-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
FTHFD_MOUSE1.106e-5346.1510-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
CROM_OMMSL1.444e-5351.69Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC32102H03EF RVDevelopN Citrus clementina cDNA clone C32102H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921249 ID=FC921249; Name=FC921249; organism=Citrus clementina; type=EST; length=626bp
GTTGTTGGACACATCATTCCCTGGAATTTTCCTACCACCATGTTTTTCAT
GAAGGTTAGCCCTGCGTTAGCCGCTGGGTGCACAATGATTGTCAAGCCTG
CTGAGCAAACTCCCCTTATTGCTCTTTATTTTGCCCATCTTGCCAAGCTG
GCTGGAGTACCTGATGGAGTGCTTAATGTTGTACCTGGATTTGGACCAAC
TGCTGGTGCTGCCATCGCCTCCCATATGGACATTGATAAAGTTAGTTTTA
CAGGGTCTACGGATGTCGGACGTCAAGTGATGCAGGCCGCAGCAACAAGC
AACTTGAAGCCAGTTTCACTAGAATTAGGTGGCAAGTCGCCTCTCTTGAT
TTTTGATGATGTTGATGTAAACACAGCTGCAGACATGGCGCTTCTGGGCA
TCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCTCGTGTTTATGTC
CAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGTCGAAAAGGCAAA
AGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTCGTCAAGGACCCC
AGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTACATTGAGCATGGC
AAGAGGGAAGGAGCCACATTGTTAAC
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