FC921249

Overview
NameFC921249
Unique NameFC921249
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length626
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.499e-47
Identity = 95/201 (47.26%), Postives = 129/201 (64.18%), Query Frame = 1
Query:   22 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            WN+P  +   K +PALAAG  M+ KP+E TPL AL  A +   AGVP GV NVV G G + GA +  H DI KVSFTG  + G++VM  A  S+LK V++ELGGKSPL++FDD D++ AAD+A+    F+ G++C   +RV++   + D F +K++E+ K   VG P D     GP V   Q D++L +IE GK EGA LL
Sbjct:  152 WNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFMHRSVKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLL 351          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.876e-47
Identity = 94/201 (46.77%), Postives = 130/201 (64.68%), Query Frame = 1
Query:   22 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            WN+P  +   K +PALAAG  M+ KP+E TPL AL  A +   AGVP GV NVV G G + GA +  H DI KVSFTG  + G++VM  A  S+LK V++ELGGKSPL++F+D D++ AAD+A+    F+ G++C   +RV+V   + D F ++++E+ K   VG P D A   GP V   Q D++L +I+ GK EGA LL
Sbjct:  152 WNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVGKPTDAATNFGPLVSAAQLDKVLGFIDSGKAEGAKLL 351          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_CHRSD (Betaine aldehyde dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betB PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.002e-46
Identity = 97/208 (46.63%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            V+G I  WN+P  +   K +PALAAG  ++ KP+E TPL AL  A +   AG+PDGV NVV G G   GA +  H  I KVSFTG    G++VM AA  S LK V++ELGGKSPL++F D D++ AAD A++   ++ G+IC   +RV+V+    + FE KLVE+      GDP DP+V  GP V  +  +++LSYI  GK +GA +L
Sbjct:  145 VIGAIGAWNYPIQIACWKAAPALAAGNAIVFKPSEVTPLTALKLAEIFTEAGLPDGVFNVVQGDG-RVGAMLTEHEGIAKVSFTGEVGTGKKVMAAAGGSTLKDVTMELGGKSPLIVFADADLDRAADAAMMANFYSSGQICTNGTRVFVERSAKEAFEAKLVERVARIKAGDPMDPSVNFGPLVSFEHQEKVLSYIALGKEQGARVL 351          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.309e-46
Identity = 98/208 (47.12%), Postives = 132/208 (63.46%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            VV  I  WN+P  +   K +PALAAG  MI KP+E T L AL  A +   AG+P GV NV+ G G   G  +  H  I KVSFTG    G++VM  AA S LK V++ELGGKSPL+IF DVD++ AAD+A++   ++ G++C   +RV+V + +   FE+K+VE+ K   +GDP D  V  GP V  +  D ++ YI+ GKREGATLL
Sbjct:  145 VVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADVDLDKAADIAMMANFYSSGQVCTNGTRVFVPQALQAAFEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLL 352          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.309e-46
Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            VV  I  WN+P  +   K +PALAAG  MI KP+E T L  L  A +   AGVP+GV NV+ G G   G  I  H  I+KVSFTG TD G++VM +A++S+LK V++ELGGKSPL++FDD D++ AAD+A++   ++ G++C   +RV+V   +  EFE K++E+ K    G+P D  +  GP V  +  + +L YI  GK +GA LL
Sbjct:  145 VVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKAEFEAKILERVKRIRAGNPEDENINFGPLVSFEHMESVLGYIAKGKEQGARLL 352          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_PSE14 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=betB PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.309e-46
Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            VV  I  WN+P  +   K +PALAAG  MI KP+E T L  L  A +   AGVP+GV NV+ G G   G  I  H  I+KVSFTG TD G++VM +A++S+LK V++ELGGKSPL++FDD D++ AAD+A++   ++ G++C   +RV+V   +  EFE K++E+ K    G+P D  +  GP V  +  + +L YI  GK +GA LL
Sbjct:  145 VVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKAEFEAKILERVKRIRAGNPEDENINFGPLVSFEHMESVLGYIAKGKEQGARLL 352          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_PSESM (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. tomato GN=betB PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.710e-46
Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            VV  I  WN+P  +   K +PALAAG  MI KP+E T L  L  A +   AGVP+GV NV+ G G   G  I  H  I+KVSFTG TD G++VM +A++S+LK V++ELGGKSPL++FDD D++ AAD+A++   ++ G++C   +RV+V   +  EFE K++E+ K    G+P D  +  GP V  +  + +L YI  GK +GA LL
Sbjct:  145 VVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKGEFEAKILERVKRIRPGNPEDENINFGPLVSFEHMESVLGYIAKGKEQGARLL 352          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.710e-46
Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            VV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+PDGV NVV G G   G  +  H  I+K+SFTG  + G++VM +AA S LK V++ELGGKSPL+I +D D+N AAD+A++   F+ G++C   +RV+V + +  +FEK +VE+ K   +GDP       GP       +++LS+IE GK++GA +L
Sbjct:  145 VVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSLLVDFEKAVVERVKRIRIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVL 352          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.710e-46
Identity = 94/208 (45.19%), Postives = 133/208 (63.94%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 624
            VV  I  WN+P  +   K +PALAAG  MI KP+E TPL AL  A +   AG+PDGV NVV G G   G  +  H  I+K+SFTG  + G++VM +AA S LK V++ELGGKSPL+I +D D+N AAD+A++   F+ G++C   +RV+V +    +FEK +VE+ K  ++GDP       GP       +++LS+IE GK++GA +L
Sbjct:  145 VVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLADFEKAVVERVKRILIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVL 352          
BLAST of FC921249 vs. ExPASy Swiss-Prot
Match: BADH_SCHPO (Probable betaine aldehyde dehydrogenase OS=Schizosaccharomyces pombe GN=meu8 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.233e-46
Identity = 95/204 (46.57%), Postives = 133/204 (65.20%), Query Frame = 1
Query:    1 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG 612
            V+G I PWNFP  M   K+ PA+A+G  +++KP+E  P   L FA + K AG+PDGVLNV+ G G  +GAA++ H  I  ++FTGS   G+++M AAA  N+ P++LELGGKSPL+I +D D++ A   A   I FN+GE C A+SR+ V E + DE    LV +A   ++G+  DP V  GP V K QF++I+SYI+    EG
Sbjct:  165 VIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAGLPDGVLNVIIGSGKESGAALSCHPKIAYLAFTGSLATGKKIMHAAA-ENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIFFNQGEACTAASRLIVHESVADEVLGGLVSEANKLIIGNGLDPQVTLGPVVSKTQFEKIVSYIQSAINEG 367          
The following BLAST results are available for this feature:
BLAST of FC921249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BURCJ4.499e-4747.26Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BURCM5.876e-4746.77Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_CHRSD1.002e-4646.63Betaine aldehyde dehydrogenase OS=Chromohalobacter... [more]
BETB_YERPY1.309e-4647.12Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_PSEU21.309e-4645.19Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_PSE141.309e-4645.19Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_PSESM1.710e-4645.19Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_ACIBT1.710e-4645.19Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS1.710e-4645.19Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BADH_SCHPO2.233e-4646.57Probable betaine aldehyde dehydrogenase OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionC32102H03EF RVDevelopN Citrus clementina cDNA clone C32102H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921249 ID=FC921249; Name=FC921249; organism=Citrus clementina; type=EST; length=626bp
GTTGTTGGACACATCATTCCCTGGAATTTTCCTACCACCATGTTTTTCAT
GAAGGTTAGCCCTGCGTTAGCCGCTGGGTGCACAATGATTGTCAAGCCTG
CTGAGCAAACTCCCCTTATTGCTCTTTATTTTGCCCATCTTGCCAAGCTG
GCTGGAGTACCTGATGGAGTGCTTAATGTTGTACCTGGATTTGGACCAAC
TGCTGGTGCTGCCATCGCCTCCCATATGGACATTGATAAAGTTAGTTTTA
CAGGGTCTACGGATGTCGGACGTCAAGTGATGCAGGCCGCAGCAACAAGC
AACTTGAAGCCAGTTTCACTAGAATTAGGTGGCAAGTCGCCTCTCTTGAT
TTTTGATGATGTTGATGTAAACACAGCTGCAGACATGGCGCTTCTGGGCA
TCCTGTTTAACAAGGGAGAAATTTGTGTGGCAAGTTCTCGTGTTTATGTC
CAGGAAGGAATTTATGATGAATTTGAAAAGAAGTTGGTCGAAAAGGCAAA
AGCTTGGGTAGTTGGTGATCCTTTTGATCCTGCAGTTCGTCAAGGACCCC
AGGTCGATAAGAAGCAGTTCGATAGAATTCTTTCGTACATTGAGCATGGC
AAGAGGGAAGGAGCCACATTGTTAAC
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