FC921256
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.241e-40 Identity = 80/183 (43.72%), Postives = 118/183 (64.48%), Query Frame = 1 Query: 145 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 690 S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V LGG ++ QPF I Y+YG+ D +K M+KEE Q A++LA+ RD SGGV V I Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVI 196
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.822e-40 Identity = 80/183 (43.72%), Postives = 118/183 (64.48%), Query Frame = 1 Query: 145 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 690 S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V LGG ++ QPF I Y+YG+ D +K M+KEE Q A++LA+ RD SGGV V I Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHLVVI 196
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB6_ENCCU (Probable proteasome subunit beta type-6 OS=Encephalitozoon cuniculi GN=PRE3 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.151e-36 Identity = 79/187 (42.25%), Postives = 120/187 (64.17%), Query Frame = 1 Query: 133 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 693 N GTTII + Y+ GV++GADSRTS G YV++RV+DK+TQ+TD +++CRSGS+AD+Q +S Y+R +L ++ V+ AA L + Y N + L G+IV G+D + +++ + LGG++ E+ +AI ++YG+ D W+ GM+ EE + V AVS AI RD ASGG +R I+ Sbjct: 4 NEKEMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL-AGLIVAGYD--DKPRVFNISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNASGGCIRMSAIS 187
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22 Identity = 63/195 (32.31%), Postives = 101/195 (51.79%), Query Frame = 1 Query: 106 KMDLKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 690 K L+M+ F GTTI+GV Y GGVVLGAD+R + G VA++ +KI + DN+Y C +G+AAD+++ + + L H + G+ V A +++ + + + + +I+GG D G ++ + G+ + P+ F+ +K MTKEEA LV +A+S I D SG V I Sbjct: 22 KTGLRMKGFM---KTGTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCGAGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQGHISAALILGGID-INGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDLGSGSNVDVTVI 212
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 62/196 (31.63%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 94 CFRGKMDLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 675 C R M L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C +G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G ++ + G+ PFA F+ +KEG+T++E +LV +A+ I D SG V Sbjct: 19 CKRNDM-LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNV 212
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 61/196 (31.12%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 94 CFRGKMDLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVV 675 C R M L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C +G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G ++ + G+ PFA F+ +KEG+T++E +LV +++ I D SG V Sbjct: 19 CKRNDM-LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNV 212
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB7_PIG (Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19 Identity = 52/181 (28.73%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 151 GTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 693 GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA+QLV +A++ I D SG + I+ Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEAIAAGIFNDLGSGSNIDLCVIS 222
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.345e-19 Identity = 54/196 (27.55%), Postives = 100/196 (51.02%), Query Frame = 1 Query: 112 DLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 693 D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA++LV +A++ I D SG + I+ Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVIS 222
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.345e-19 Identity = 54/196 (27.55%), Postives = 100/196 (51.02%), Query Frame = 1 Query: 112 DLKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 693 D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA++LV +A++ I D SG + I+ Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVIS 222
BLAST of FC921256 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 51/181 (28.18%), Postives = 95/181 (52.49%), Query Frame = 1 Query: 151 GTTIIGVTYNGGVVLGADSRTSTGVYVANRVSDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 693 GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA++LV +A++ I D SG + I+ Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVIS 222 The following BLAST results are available for this feature:
BLAST of FC921256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921256 ID=FC921256; Name=FC921256; organism=Citrus clementina; type=EST; length=694bpback to top |