FC921258

Overview
NameFC921258
Unique NameFC921258
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11587 contig Ccv1_Contig11587:155..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN11_ARATH (Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30
Identity = 60/125 (48.00%), Postives = 84/125 (67.20%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y EAL  ++ +F+ Q+SG+L  N +++WR  S L DG + G+DL  G +DAGDH+KFG PMAFT T+LSW+++EYGD +    +L  A +++KW TDY I AH   NVL   VG+ D DH   +R
Sbjct:   40 YGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQR 164          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN14_ARATH (Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44560 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.162e-29
Identity = 61/127 (48.03%), Postives = 88/127 (69.29%), Query Frame = 3
Query:  324 KKYAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            + Y +AL  ++ +F+ Q+SGKL +N +++WRGDSAL+DG D  +DLT G YDAGD+MKFGFP+AF  T+L+W+ +E   Q+    + + A  +LKW TD+LI AHP+ NVL   VG+ + DH    R
Sbjct:   32 RNYGDALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPLAFFTTMLAWSNIEMATQLKAHQEQENALAALKWATDFLIKAHPEPNVLYGQVGDGNSDHECWMR 158          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN2_ORYSJ (Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.417e-29
Identity = 58/125 (46.40%), Postives = 86/125 (68.80%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y  AL  ++ +F+ Q+SG L  + +I+WR +S L DG+  G+DL  G YDAGD++KFG PMAFT T+++W+++EYG++M    +L  A +++KW TDY   AHP+ NVL   VG+ D DHN  +R
Sbjct:   41 YGMALSKSILYFEAQRSGVLPGSQRIAWRANSGLADGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGEEMAAAGELGHAVEAIKWGTDYFAKAHPEPNVLYAEVGDGDSDHNCWQR 165          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUNZ_CLOSR (Endoglucanase Z OS=Clostridium stercorarium GN=celZ PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.768e-29
Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVNNKI-SWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHN 689
            Y EAL+ A+ F++ Q+SGKL  NK  +WRGDS L DG D+GLDLT G YDAGDH+KF  PMA++ T+L+WA  E  + ++   Q+    D++KW++DYLI  HP  NV    VG+   DH+
Sbjct:   32 YGEALQKAIMFYEFQRSGKLPENKRDNWRGDSGLNDGADVGLDLTGGWYDAGDHVKFNLPMAYSQTMLAWAAYEAEEALERSGQMGYLLDAIKWVSDYLIKCHPSPNVFYYQVGDGHLDHS 152          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN1_ORYSJ (Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.768e-29
Identity = 59/120 (49.17%), Postives = 82/120 (68.33%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDH 686
            Y  AL  ++ +F+ Q+SG L  N +I+WR +S L DG+  G+DL  G YDAGD++KFGFPMAFT T+++W++LEYG QM    +L  A D+++W  DY + AHP  NVL   VG+ D DH
Sbjct:   42 YRMALSKSILYFEAQRSGVLPGNQRIAWRANSGLADGKANGVDLVGGYYDAGDNVKFGFPMAFTVTMMAWSVLEYGKQMAAAGELGHAMDAVRWGADYFVKAHPAPNVLYGEVGDGDSDH 161          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUNA_BACPU (Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29
Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDH 686
            Y E L+ +M F++ Q+SG+L  +N+++WRGDS LKDG+D+G DLT G YDAGDH+KFG PMA++A VL+W + EY +  +  + L    D +KW TDY + AH   N     VG+ + DH
Sbjct:   49 YVEVLQKSMLFYEAQRSGRLPESNRLNWRGDSGLKDGKDVGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDEILDQIKWATDYFLKAHTGPNEFWAQVGDGNADH 168          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN16_ORYSJ (Endoglucanase 16 OS=Oryza sativa subsp. japonica GN=Os06g0247900 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29
Identity = 60/125 (48.00%), Postives = 84/125 (67.20%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y EAL+ ++ +F+ Q+SG+L +  +++WR  S L DG + G+DL  G YDAGDH+KFG PMAFT T+LSW++LEYG  +    +L  A D++KW TDY I AH K + L   VG+ D DH   +R
Sbjct:   31 YEEALRKSLLYFEAQRSGRLPHGQRVAWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSLLEYGADVAAAGELAHALDAIKWGTDYFIKAHTKPHELWAEVGDGDTDHYCWQR 155          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29
Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y +AL  ++ FF+ Q+SG L  N ++SWR  S L DG+  G+DL  G YDAGD++KFG PMAFT T + W+I+EYG Q++   +L  A D++KW TDY I AHP+ NVL   VG+   DH   +R
Sbjct:   27 YKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGVDLVGGYYDAGDNVKFGLPMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWGTDYFIKAHPEPNVLYGEVGDGKSDHYCWQR 151          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUNA_CALSA (Endoglucanase A OS=Caldocellum saccharolyticum GN=celA PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28
Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVN-NKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDH 686
            Y EAL+ A+ F++ Q SGKL N  + +WRGDSALKDG+D GLDLT G +DAGDH+KF  PM++T T+LSWA  EY D      QL+   + ++W+ DY +  HP + V    VG+  KDH
Sbjct:   28 YGEALQKAIMFYEFQMSGKLPNWVRNNWRGDSALKDGQDNGLDLTGGWFDAGDHVKFNLPMSYTGTMLSWAAYEYKDAFVKSGQLEHILNQIEWVNDYFVKCHPSKYVYYYQVGDGGKDH 147          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN15_ARATH (Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44570 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28
Identity = 60/120 (50.00%), Postives = 84/120 (70.00%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDH 686
            Y EAL  ++ +F+ Q+SGKL ++ ++ WRGDSAL+DG D  +DLT G YDAGD+MKFGFP+AFT T+L+W+ +E   Q+    +      +L+W TDYLI AHP+ NVL   VG+ + DH
Sbjct:   34 YGEALTKSLLYFEAQRSGKLPLDQRVIWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPLAFTTTMLAWSSVEMESQLKAHQEHGNTLAALRWATDYLIKAHPEPNVLYGQVGDANLDH 153          
The following BLAST results are available for this feature:
BLAST of FC921258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN11_ARATH6.814e-3048.00Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32... [more]
GUN14_ARATH1.162e-2948.03Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN2_ORYSJ4.417e-2946.40Endoglucanase 2 OS=Oryza sativa subsp. japonica GN... [more]
GUNZ_CLOSR5.768e-2949.59Endoglucanase Z OS=Clostridium stercorarium GN=cel... [more]
GUN1_ORYSJ5.768e-2949.17Endoglucanase 1 OS=Oryza sativa subsp. japonica GN... [more]
GUNA_BACPU7.534e-2947.50Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 S... [more]
GUN16_ORYSJ7.534e-2948.00Endoglucanase 16 OS=Oryza sativa subsp. japonica G... [more]
GUN19_ARATH9.839e-2948.80Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11... [more]
GUNA_CALSA1.285e-2850.00Endoglucanase A OS=Caldocellum saccharolyticum GN=... [more]
GUN15_ARATH1.285e-2850.00Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44... [more]

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Properties
Property NameValue
Genbank descriptionC32102H12EF RVDevelopN Citrus clementina cDNA clone C32102H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921258 ID=FC921258; Name=FC921258; organism=Citrus clementina; type=EST; length=742bp
GAGCCAAATTAAGCTCCTTACCACTCACATTTCACCCACTAGAGAGAAAT
ACGGTGCTGCGTTTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTAC
TCTCTTCACCCAATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTT
GACGGCATTGTGTTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTC
GGATGGTTCTTGGTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGT
TTACACTATTAAAAAGAAAACAAGTCACTCTGATAAACCGGCTCCGGTTC
CCGGTCCCCCCGGCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTC
GCAATGCAGTTCTTCGACGTACAAAAATCGGGAAAGTTAGTGAATAATAA
GATATCATGGAGAGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTT
TGGATCTCACAAAAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGG
TTTCCGATGGCTTTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTA
TGGAGATCAGATGGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTC
TCAAGTGGATCACTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTC
CTTATTGTTCANGTGGGCAATCCTGATAAGGACCACAATGTTGGGAAAAG
ACTGAAGCATGACTGAGAGAGACACTCACTCAGTCACACATC
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