FC921258

Overview
NameFC921258
Unique NameFC921258
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11587 contig Ccv1_Contig11587:155..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN17_ORYSJ (Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.963e-25
Identity = 55/125 (44.00%), Postives = 85/125 (68.00%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y++AL  ++ FF+ Q+SG+L  + ++ WR DSAL DG   G+DLT G YDAGD++KFGFPMAFTAT++SW ++++G           A+++++W TDYL+ A    N + V VG+  +DH+  +R
Sbjct:   25 YSDALHKSILFFEGQRSGRLPPDQRLRWRRDSALNDGATAGVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGA--HAAEAREAVRWATDYLMKATATPNTVYVQVGDAFRDHSCWER 147          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN22_ORYSJ (Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.869e-25
Identity = 53/125 (42.40%), Postives = 79/125 (63.20%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y EAL+ ++ +F+ Q+SG+L  + +++WRG S L DG   G+DL  G YDAGDH+KFG PMAFT T+LSW  +++   +    + + A +++KW TDY + AH    V    VG+ D DH   +R
Sbjct:   56 YREALEKSLLYFEAQRSGRLPYSQRVTWRGHSGLTDGLQQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIDFAADIAAAGEWRHALEAIKWGTDYFVKAHTHPFVYWAEVGDGDTDHYCWQR 180          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN21_ORYSJ (Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.869e-25
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y +AL   + +F+ Q+SG L  N ++ WRG S L DG   G+DL  G YDAGD++KFG PMAFT T+LSWA  E+ D++    + +   +++KW TDYL+ AH   + L   VG+ D DH   +R
Sbjct:   37 YKKALHSGLLYFEAQRSGHLPYNQRVRWRGHSGLADGLQQGVDLVGGYYDAGDNVKFGLPMAFTMTMLSWAAAEFWDEIAAAGERRHVLEAIKWGTDYLVKAHTAADELWAEVGDGDTDHYCWQR 161          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUNG_CLOCE (Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25
Identity = 52/121 (42.98%), Postives = 77/121 (63.64%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHN 689
            Y EAL+ ++ F++ Q+SG L  + + +WR DS +KDG D+G+DLT G YDAGDH+KF  PM++T+ +L+W++ E  D  D   Q +   D +KW  DY I  +P   V    VG+  KDH+
Sbjct:   41 YGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHS 161          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN11_ORYSJ (Endoglucanase 11 OS=Oryza sativa subsp. japonica GN=GLU4 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.600e-25
Identity = 59/126 (46.83%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVXVGNPDKDHNVGKR 701
            YA+AL  ++ FF  Q+SG+L  ++ + WR +S L DG    +DLT G YD GD++KFGFPMAFT T+LSW ++EYG +M     L+ A+D+++W  DYL+ +A     VL V VG+PD DH   +R
Sbjct:   42 YADALAKSILFFQGQRSGRLPPDQAVKWRSNSGLSDGSAANVDLTGGYYDGGDNVKFGFPMAFTTTMLSWGVVEYGGRMR-GRVLRDARDAVRWAADYLLRAATATPGVLYVGVGDPDADHRCWER 166          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN3_ARATH (Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.920e-24
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVNNK-ISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLIS-AHPKENVLIVXVGNPDKDHNVGKR 701
            Y EAL  ++ FF  Q+SG+L +++ +SWR  S L DG    +DLT G YDAGD++KF FPMAFT T+LSW+ LEYG +M    +LQ ++ +++W TDYL+  A      L V VG+P+ DH   +R
Sbjct:   25 YREALSKSLLFFQGQRSGRLPSDQQLSWRSSSGLSDGSSAHVDLTGGYYDAGDNVKFNFPMAFTTTMLSWSSLEYGKKMG--PELQNSRVAIRWATDYLLKCARATPGKLYVGVGDPNGDHKCWER 148          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN6_ORYSJ (Endoglucanase 6 OS=Oryza sativa subsp. japonica GN=Os02g0733300 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24
Identity = 54/125 (43.20%), Postives = 83/125 (66.40%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDHNVGKR 701
            Y +AL  ++ FF+ Q+SG+L  + ++ WR DS L DG    +DLT G YDAGD++KFGFPMAFTAT++SW ++++G         + A+ +++W TDYL+ A  K N + V VG+  +DH+  +R
Sbjct:   37 YGDALHKSILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFG--PHKEEARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWER 159          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN8_ORYSJ (Endoglucanase 8 OS=Oryza sativa subsp. japonica GN=Os02g0778600 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 50/120 (41.67%), Postives = 79/120 (65.83%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVXVGNPDKDH 686
            Y +AL  ++ F + Q+SGKL   N+I WRGDS ++DG+   +DLT G YDAGD++K+G P+AFT T L+W  + +  ++    +L+    +++W TDY + A  K++ L V VG+P+ DH
Sbjct:   43 YKDALTKSIMFLEAQRSGKLPPTNRIKWRGDSGMEDGKLANVDLTGGYYDAGDNVKYGLPLAFTVTTLAWTAMAFEKELKAARELENVHAAIRWGTDYFLKAATKKDHLWVQVGDPNADH 162          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24
Identity = 60/140 (42.86%), Postives = 85/140 (60.71%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDV--------------VDQLQPAQDSLKWITDYLI-SAHPKENVLIVXVGNPDKDHNVGKR 701
            YA+AL  A+ FF+ Q+SGKL    +++WR DS L DG   G+DL  G YDAGD++KFG PMAFT T+LSW+++E+GD M                V QL  A+ +++W  DYL+ +A    + L V V +P +DH   +R
Sbjct:   25 YADALDKAILFFEAQRSGKLPPGQRVAWRADSGLSDGSADGVDLAGGYYDAGDNVKFGLPMAFTVTMLSWSVIEFGDMMPARRSSFLGGIFGGGGVAQLDNARAAVRWGADYLLKAATATPDTLYVQVADPYQDHRCWER 164          
BLAST of FC921258 vs. ExPASy Swiss-Prot
Match: GUN14_ORYSJ (Endoglucanase 14 OS=Oryza sativa subsp. japonica GN=Os05g0129200 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.245e-23
Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = 3
Query:  330 YAEALKVAMQFFDVQKSGKLVN-NKISWRGDSALKDGRD--------------------------MGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKE---NVLIVXVGNPDKDHNVGKR 701
            Y  AL +++ +F+ Q+SG+L    ++ WR DSAL DG D                          M +DLT G YD+GD++KFGFPMAFT   LSW+++EYGD++D   +L  A D+++W  DYL  AH        L V VG+ D DH+  +R
Sbjct:   25 YRAALAMSLLYFEGQRSGRLPPAQRVQWRADSALADGADHRVPDLASPPSSNVSVCARTDAMQCDMQVDLTGGYYDSGDNVKFGFPMAFTVAALSWSVVEYGDRLDAAGELGHALDAVRWGADYLTRAHASAGGGEALYVQVGDGDSDHSCWQR 178          
The following BLAST results are available for this feature:
BLAST of FC921258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN17_ORYSJ2.963e-2544.00Endoglucanase 17 OS=Oryza sativa subsp. japonica G... [more]
GUN22_ORYSJ3.869e-2542.40Endoglucanase 22 OS=Oryza sativa subsp. japonica G... [more]
GUN21_ORYSJ3.869e-2544.00Endoglucanase 21 OS=Oryza sativa subsp. japonica G... [more]
GUNG_CLOCE6.600e-2542.98Endoglucanase G OS=Clostridium cellulolyticum (str... [more]
GUN11_ORYSJ6.600e-2546.83Endoglucanase 11 OS=Oryza sativa subsp. japonica G... [more]
GUN3_ARATH1.920e-2446.83Endoglucanase 3 OS=Arabidopsis thaliana GN=CEL5 PE... [more]
GUN6_ORYSJ3.275e-2443.20Endoglucanase 6 OS=Oryza sativa subsp. japonica GN... [more]
GUN8_ORYSJ4.278e-2441.67Endoglucanase 8 OS=Oryza sativa subsp. japonica GN... [more]
GUN4_ORYSJ4.278e-2442.86Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN14_ORYSJ1.245e-2338.96Endoglucanase 14 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionC32102H12EF RVDevelopN Citrus clementina cDNA clone C32102H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921258 ID=FC921258; Name=FC921258; organism=Citrus clementina; type=EST; length=742bp
GAGCCAAATTAAGCTCCTTACCACTCACATTTCACCCACTAGAGAGAAAT
ACGGTGCTGCGTTTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTAC
TCTCTTCACCCAATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTT
GACGGCATTGTGTTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTC
GGATGGTTCTTGGTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGT
TTACACTATTAAAAAGAAAACAAGTCACTCTGATAAACCGGCTCCGGTTC
CCGGTCCCCCCGGCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTC
GCAATGCAGTTCTTCGACGTACAAAAATCGGGAAAGTTAGTGAATAATAA
GATATCATGGAGAGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTT
TGGATCTCACAAAAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGG
TTTCCGATGGCTTTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTA
TGGAGATCAGATGGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTC
TCAAGTGGATCACTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTC
CTTATTGTTCANGTGGGCAATCCTGATAAGGACCACAATGTTGGGAAAAG
ACTGAAGCATGACTGAGAGAGACACTCACTCAGTCACACATC
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