FC921264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10_BOVIN (40S ribosomal protein S10 OS=Bos taurus GN=RPS10 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 60/97 (61.86%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 350 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS 97
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10B_DROME (40S ribosomal protein S10b OS=Drosophila melanogaster GN=RpS10b PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.597e-28 Identity = 59/97 (60.82%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAK 356 M +P+ +R I +YLF+EGV AKKD++ KHPE++ +PNL VIK MQS SR V+E FAW HYYWYLTN+GIE LR+YL+LP EIVP+TLK+ A+ Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPAR 97
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10_XENLA (40S ribosomal protein S10 OS=Xenopus laevis GN=rps10 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.698e-28 Identity = 58/97 (59.79%), Postives = 78/97 (80.41%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKS 350 M++P+K+R I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KSR YV+E FAW H+YWYLTN+GI++LR +L+LP EIVPATL++S Sbjct: 1 MLMPKKDRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRS 97
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10B_SCHPO (40S ribosomal protein S10-B OS=Schizosaccharomyces pombe GN=rps10b PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.785e-27 Identity = 56/98 (57.14%), Postives = 76/98 (77.55%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPA 362 M+IP++NRK I + LFQ+GV AKKD+NL KHPE+ VPNLQVIK QS SR Y++ + W +Y+ LTN+G+E+LR YL+LP+E+VPAT K+ +PA Sbjct: 1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPA 98
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10_DICDI (40S ribosomal protein S10 OS=Dictyostelium discoideum GN=rps10 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 5.195e-27 Identity = 54/95 (56.84%), Postives = 76/95 (80.00%), Query Frame = 3 Query: 72 IIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSA 353 +IP +N+ I +YLFQEGV A KD++LAKHP+I+ V NL V+++++SFKSR++V ETF W +YYW LT +GI++LRTYL +P +VPAT+KK A Sbjct: 3 LIPTENKLAIYRYLFQEGVLVAPKDFHLAKHPQIETVSNLDVLQILRSFKSRKFVTETFNWQYYYWVLTEEGIKYLRTYLQVPESVVPATMKKQA 97
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10A_DROME (40S ribosomal protein S10a OS=Drosophila melanogaster GN=RpS10a PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.157e-26 Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAK 356 M IP+ NR I +YLF+EGV AKKD + KH E+D +PNLQVIK+MQS SR +V+E FAW H+YW LTN+GIE LR YL+LP EIVP+TL ++ + Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTR 97
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10A_SCHPO (40S ribosomal protein S10-A OS=Schizosaccharomyces pombe GN=rps10a PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.974e-26 Identity = 54/97 (55.67%), Postives = 74/97 (76.29%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 359 M+IP++NRK I + LF +GV AKKD+NL KHPE+ VPNLQVIK QS SR Y++ + W +Y+ LTN+G+E+LR YL+LP+E+VPAT K+ +P Sbjct: 1 MLIPKENRKAIHQALFSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRP 97
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10L_HUMAN (Putative 40S ribosomal protein S10-like protein OS=Homo sapiens GN=RPS10P5 PE=5 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.578e-26 Identity = 57/94 (60.64%), Postives = 73/94 (77.66%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATL 341 M++P+KNR I + LF+EGV AKKD ++ KHPE+ +VPNL V+K MQS KSR V+E FAW H+YWYLTN+G ++LR YL+LP EIVPATL Sbjct: 1 MLMPKKNRIAIHELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGCVKEQFAWRHFYWYLTNEGSQYLRDYLHLPPEIVPATL 94
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10B_YEAST (40S ribosomal protein S10-B OS=Saccharomyces cerevisiae GN=RPS10B PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPA 362 M++P++ R +I +YLFQEGV AKKD+N AKH EID NL VIK +QS S+ YV+ F+W +YY+ LT +G+E+LR YLNLP IVP T + P+ Sbjct: 1 MLMPKQERNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPS 98
BLAST of FC921264 vs. ExPASy Swiss-Prot
Match: RS10A_YEAST (40S ribosomal protein S10-A OS=Saccharomyces cerevisiae GN=RPS10A PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25 Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 69 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 359 M++P+++R +I +YLFQEGV AKKD+N AKH EID NL VIK +QS S+ YV+ F+W +YY+ LT +G+E+LR YLNLP IVP T + P Sbjct: 1 MLMPKEDRNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNP 97 The following BLAST results are available for this feature:
BLAST of FC921264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921264 ID=FC921264; Name=FC921264; organism=Citrus clementina; type=EST; length=727bpback to top |