FC921266

Overview
NameFC921266
Unique NameFC921266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 62/153 (40.52%), Postives = 89/153 (58.17%), Query Frame = 2
Query:  209 STDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTG 667
            + D++  ++ESW++K+GKS+ S  E   R EIFK+ L+ ID  N +     SY +GLN+F+D++ EEF++ YL      +                    N +  +  + LP  VDWR  GAV  +K+Q  CGGCWAFSA+A VEGIN+IVTG
Sbjct:   34 TNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTN--RSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT---------------KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTG 169          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.831e-26
Identity = 67/151 (44.37%), Postives = 86/151 (56.95%), Query Frame = 2
Query:  230 LFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            +FESWM+KHGK ++S  EK  RL IF+DNL+ I  RN E     SY LGLN F+D+S  E+  +   G  P                      N +   + + LP+SVDWR +GAVT VK+Q  C  CWAFS V AVEG+N+IVTG+   L
Sbjct:   55 MFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAE---NLSYRLGLNRFADLSLHEY-GEICHGADPRPPR----------NHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTL 191          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.831e-26
Identity = 66/175 (37.71%), Postives = 97/175 (55.43%), Query Frame = 2
Query:  179 IVGYSLEVLTSTD------KLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVT-HVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            ++  SL V+T+T+      +++ ++E W++++GK++    EK  R +IFKDNLK I+  N +     SY  GLN+FSD++ +EF+  YL G                           + YK  + LP  VDWR++GAV   VK Q  CG CWAF+A  AVEGINQI TG+  +L
Sbjct:   17 LISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPN--RSYERGLNKFSDLTADEFQASYLGGKMEKKS--------------LSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSL 175          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.476e-25
Identity = 71/159 (44.65%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  230 LFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFL------YKNVED--LPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            +FESWM+KHGK + S  EK  RL IF+DNL+ I+ RN E     SY LGL  F+D+S  E+K +   G  P                      NH        YK   D  LP+SVDWR +GAVT VK+Q  C  CWAFS V AVEG+N+IVTG+   L
Sbjct:   48 IFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAE---NLSYRLGLTGFADLSLHEYK-EVCHGADPRPPR------------------NHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTL 184          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 68/160 (42.50%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  203 LTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            L S + L +L+E W   H  S  S  EK  R  +FK NL H+   N+   +   Y L LN+F+DM++ EF++ Y  G K +                       F+Y+ V  +P SVDWRKKGAVT VK+Q  CG CWAFS V AVEGINQI T K  AL
Sbjct:   30 LASEESLWDLYERWRSHHTVSR-SLGEKHKRFNVFKANLMHVHNTNK---MDKPYKLKLNKFADMTNHEFRSTY-AGSKVNHPRMFRGTPHENGA---------FMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVAL 175          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24
Identity = 66/161 (40.99%), Postives = 90/161 (55.90%), Query Frame = 2
Query:  203 LTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQ-SVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            L S D L  L+E W   H  + +  +EK  R  +FK+N+K I   N++    + Y L LN+F DM+++EF++KY  G K                         F+Y+NV  LP  S+DWR KGAVT VK+Q  CG CWAFS +A+VEGINQI TG+  +L
Sbjct:   30 LASEDSLWNLYEKWRTHHTVARD-LDEKNRRFNVFKENVKFIHEFNQKKD--APYKLALNKFGDMTNQEFRSKY-AGSKIQHHR---------SQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSL 177          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24
Identity = 66/160 (41.25%), Postives = 85/160 (53.12%), Query Frame = 2
Query:  203 LTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            L S + L  L+E W   H  S  S  EK  R  +FK N  H+   N+   +   Y L LN+F+DM++ EF+N Y +G K                         F+Y+ V+ +P SVDWRKKGAVT VK+Q  CG CWAFS + AVEGINQI T K  +L
Sbjct:   28 LESEESLWGLYERWRSHHTVSR-SLHEKQKRFNVFKHNAMHVHNANK---MDKPYKLKLNKFADMTNHEFRNTY-SGSKVKHHRMFRGGPRGNGT---------FMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSL 173          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.265e-24
Identity = 65/160 (40.62%), Postives = 87/160 (54.37%), Query Frame = 2
Query:  203 LTSTDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            L S + L +L+E W   H  S  S  EK  R  +FK N+ H+   N+   +   Y L LN+F+DM++ EF++ Y  G K +  +                    F+Y+ V  +P SVDWRKKGAVT VK+Q  CG CWAFS + AVEGINQI T K  +L
Sbjct:   30 LESEESLWDLYERWRSHHTVSR-SLGEKHKRFNVFKANVMHVHNTNK---MDKPYKLKLNKFADMTNHEFRSTY-AGSKVNHHKMFRGSQHGSGT---------FMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSL 175          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.265e-24
Identity = 65/174 (37.36%), Postives = 93/174 (53.45%), Query Frame = 2
Query:  179 IVGYSLEVLTSTD------KLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            ++  SL V T T+      ++  ++E W++++ K++    EK  R +IFKDNLK +D  N     T  + +GL  F+D+++EEF+  YL        +                    +LYK  + LP  VDWR  GAV  VK+Q  CG CWAFSAV AVEGINQI TG+  +L
Sbjct:   20 LLSSSLGVATETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRT--FEVGLTRFADLTNEEFRAIYLRKKMERTKD--------------SVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISL 177          
BLAST of FC921266 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 58/157 (36.94%), Postives = 90/157 (57.32%), Query Frame = 2
Query:  212 TDKLVELFESWMLKHGKSHESTEEKLHRLEIFKDNLKHIDARNRELQITSSYWLGLNEFSDMSHEEFKNKYLTGLKPDDDEFXXXXXXXXXXXXXXXXXNHFLYKNVEDLPQSVDWRKKGAVTHVKNQNPCGGCWAFSAVAAVEGINQIVTGKSTAL 682
            +D +++ FE WM ++G+ ++  +EK+ R +IFK+N+ HI+  N   +  +SY LG+N+F+DM++ EF  +Y TGL                          F   ++  +PQS+DWR  GAVT VKNQ  CG CWAF+++A VE I +I  G   +L
Sbjct:   30 SDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNN--RNGNSYTLGINQFTDMTNNEFVAQY-TGLS-------------LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSL 170          
The following BLAST results are available for this feature:
BLAST of FC921266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
ACTN_ACTCH3.964e-2640.52Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CPR4_ARATH8.831e-2644.37Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR2_ARATH8.831e-2637.71Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CPR3_ARATH7.476e-2544.65Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSEP_PHAVU1.275e-2442.50Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSP_HEMSP2.841e-2440.99Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSEP_RICCO2.841e-2441.25Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSEP_VIGMU8.265e-2440.63Vignain OS=Vigna mungo PE=1 SV=1[more]
CPR1_ARATH8.265e-2437.36Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
ANAN_ANACO2.405e-2336.94Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32103A08EF RVDevelopN Citrus clementina cDNA clone C32103A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921266 ID=FC921266; Name=FC921266; organism=Citrus clementina; type=EST; length=683bp
GAAGTAATTAACTTGAAGATAAAGGGTGGGGGAGAGAGAGAGAGAGAGAG
AGATGAAAATGTTATCTTCCAATTGTAAGTTGTTGCTTCGTCTTTCTTTG
TGCGTGTCTCTCTTGATGATCATATGCATACGCTGCTCTAGCAGTAGAAC
TCTTCAAGGTCATGATGGTGAGTTCTCCATTGTGGGGTATTCACTAGAGG
TGTTGACATCCACGGACAAGCTGGTTGAGCTATTCGAGTCATGGATGTTG
AAACATGGGAAATCGCATGAAAGCACGGAAGAGAAGTTGCATAGATTGGA
GATATTCAAAGACAACTTGAAGCACATTGATGCGAGGAACAGAGAGCTGC
AAATTACTAGTAGCTATTGGCTTGGTCTGAATGAGTTTTCAGATATGAGC
CACGAAGAGTTCAAGAACAAGTACTTAACAGGACTCAAACCCGATGATGA
TGAGTTCCGCAGAAGGAGTCACCGCGACTCCAGTAGTAGATCTTCTGCTA
GCAGTAGTAATCATTTTTTGTACAAAAATGTAGAGGATTTGCCTCAATCC
GTTGACTGGAGGAAGAAAGGAGCTGTCACTCATGTCAAAAACCAAAATCC
TTGTGGTGGATGTTGGGCATTTTCAGCAGTAGCAGCAGTGGAGGGGATAA
ATCAGATAGTGACGGGAAAATCTACGGCGTTGT
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