FC921277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921277 vs. ExPASy Swiss-Prot
Match: SPL7_ORYSJ (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica GN=SPL7 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 2 Query: 560 IPSCLVDGCTADLGKCRDYHRRHKVCELHSKTPQVTIHGREQRFC 694 +P C V+GC L ++YHRRHKVCE+H+K P+V +HG EQRFC Sbjct: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFC 149
BLAST of FC921277 vs. ExPASy Swiss-Prot
Match: SPL7_ORYSI (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. indica GN=SPL7 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 2 Query: 560 IPSCLVDGCTADLGKCRDYHRRHKVCELHSKTPQVTIHGREQRFC 694 +P C V+GC L ++YHRRHKVCE+H+K P+V +HG EQRFC Sbjct: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFC 149
BLAST of FC921277 vs. ExPASy Swiss-Prot
Match: SPL9_ARATH (Squamosa promoter-binding-like protein 9 OS=Arabidopsis thaliana GN=SPL9 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 2 Query: 527 KRARVPGNGT--QIPSCLVDGCTADLGKCRDYHRRHKVCELHSKTPQVTIHGREQRFC 694 +R R G+G QIP C V+GC DL + Y+ RH+VC +HSKTP+VT+ G EQRFC Sbjct: 58 RRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFC 115
BLAST of FC921277 vs. ExPASy Swiss-Prot
Match: SPL6_ARATH (Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana GN=SPL6 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 2 Query: 527 KRARVPGNGTQIPSCLVDGCTADLGKCRDYHRRHKVCELHSKTPQVTIHGREQRFC 694 K++R +Q P C V GC+ DL +DYH+RH+VCE HSKT V ++G EQRFC Sbjct: 110 KKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFC 165
BLAST of FC921277 vs. ExPASy Swiss-Prot
Match: SPL3_ORYSJ (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. japonica GN=SPL3 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 2 Query: 527 KRARVPGNGTQIPSCLVDGCTADLGKCRDYHRRHKVCELHSKTPQVTIHGREQRFC 694 K+ +V TQ P C V+GC DL + YHR+H+VCE HSKT +V + G E+RFC Sbjct: 168 KKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFC 223
BLAST of FC921277 vs. ExPASy Swiss-Prot
Match: SPL3_ORYSI (Squamosa promoter-binding-like protein 3 OS=Oryza sativa subsp. indica GN=SPL3 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 2 Query: 527 KRARVPGNGTQIPSCLVDGCTADLGKCRDYHRRHKVCELHSKTPQVTIHGREQRFC 694 K+ +V TQ P C V+GC DL + YHR+H+VCE HSKT +V + G E+RFC Sbjct: 168 KKVKVAQQNTQNPHCQVEGCNVDLSSAKPYHRKHRVCEPHSKTLKVIVAGLERRFC 223 The following BLAST results are available for this feature:
BLAST of FC921277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921277 ID=FC921277; Name=FC921277; organism=Citrus clementina; type=EST; length=696bpback to top |