FC921294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: GLYR1_PONAB (Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 137 SPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGGSGKGQFAKLAKSITIATTMVG 697 +PT+ ++G++G G+MG + ++LL G+TVTV++RT K + GA L +P + S D+ F+ V P + ++L P SG L G+RP VDM+T + ++APVSG + + G L I A GD + + + F MGK ++ G+ AK + I + G Sbjct: 264 TPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWDRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPRKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFF----LGEVGNAAKMMLIVNMVQG 445
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: GLXR_ECOLI (2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=glxR PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 64/179 (35.75%), Postives = 97/179 (54.19%), Query Frame = 2 Query: 152 RVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSK-AQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGK-VNYMGGSGKGQFAKLAKSITIA 682 ++G+IG GIMG M +L AG+ + V T+ A LL +GA ++ + SD++F +V V VL + + L+ G IVDM++ +DAPVSGG+ GA+ GTL+I GGDE+V +++ PLF L+GK + +GG+G GQ K+A I +A Sbjct: 2 KLGFIGLGIMGTPMAINLARAGHQLHV--TTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLK-GKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVA 177
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: GLYR1_MOUSE (Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 2 Query: 137 SPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGKVNYMGGSGKGQFAKLAKSITIATTMVG 697 +PT+ ++G++G G+MG + ++LL G+TVTV+NRT K GA L +P + S D+ F+ V P + ++L P SG L G+RPG VDM+T + ++APVSG + + G L I A GD + + + F MGK ++ G+ AK + I + G Sbjct: 263 TPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKE------GARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP-SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFF----LGEVGNAAKMMLIVNMVQG 438
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_DICDI (Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17 Identity = 52/188 (27.66%), Postives = 93/188 (49.47%), Query Frame = 2 Query: 134 ASPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMGK-VNYMGGSGKGQFAKLAKSITIATTMV 694 ++ ++ VG+IG G MG +L+ G+ + VF+ + L + GA +A+SP +A ++DV+ +++ + V++V +G +RPG +++D +T + +D PVSGG GA+ GTL GG E MGK + + G G GQ AK+ ++ + +M+ Sbjct: 18 STSSSKTVGFIGLGNMGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYC-GENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMI 204
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_BOVIN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=HIBADH PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.511e-17 Identity = 57/199 (28.64%), Postives = 95/199 (47.74%), Query Frame = 2 Query: 107 MATVASTDPASPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHP-SSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKLAKSITIATTMVG 697 +A V S AS T VG+IG G MG M +L+ GY + +++ + LD G + SP +A ++D + +++ P+ + + + ++G L ++ G +++D +T +DAPVSGG A++G L GG E L MG V Y G G GQ AK+ ++ +A +M+G Sbjct: 28 LAAVCSRSMAS--KTPVGFIGVGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIITML--PTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIG 222
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: Y229_SYNY3 (Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain PCC 6803) GN=slr0229 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 55/178 (30.90%), Postives = 86/178 (48.31%), Query Frame = 2 Query: 149 TRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSK--AQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHPSSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKLAKSI 673 +++ G G+MG M +L+ GY +NRTL + Q G + S A+ +D++ + VG DV+ ++L S G +P +I+D +T + +DAPV+GGD GA GTL I GGD S ++ P+ +G K+ + G SG GQ KL + Sbjct: 4 SKIAVFGLGVMGSPMAQNLVKNGYQTVGYNRTLERPSVQEAAKAGVKVVTSIAVAAANADIILTCVGDEKDVQQLILG-SGGIAEYAKPQALIIDCSTIGKTAAYELATNLKLQGLRFLDAPVTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQV 180
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_RAT (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 57/199 (28.64%), Postives = 97/199 (48.74%), Query Frame = 2 Query: 107 MATVASTDPASPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHP-SSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKLAKSITIATTMVG 697 +A V S AS T VG+IG G MG M +L+ GY + +++ + + G +A SP +A ++D + +++ PS + + ++ ++G L ++ G +++D +T +DAPVSGG A++G L GG E+ L MG V Y G G GQ AK+ ++ +A +M+G Sbjct: 27 LAAVCSRSMAS--KTPVGFIGLGNMGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITML--PSSMNSIEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIG 221
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_MOUSE (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 58/199 (29.15%), Postives = 96/199 (48.24%), Query Frame = 2 Query: 107 MATVASTDPASPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHP-SSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKLAKSITIATTMVG 697 +A V S AS T VG+IG G MG M +L+ GY + +++ + + G +A SP +A ++D + +++ PS + V ++ ++G L ++ G +++D +T +DAPVSGG A++G L GG E L MG V Y G G GQ AK+ ++ +A +M+G Sbjct: 27 LAAVCSRSMAS--KTPVGFIGLGNMGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITML--PSSMNAVEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIG 221
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_PONAB (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 56/198 (28.28%), Postives = 93/198 (46.97%), Query Frame = 2 Query: 110 ATVASTDPASPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHP-SSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKLAKSITIATTMVG 697 A V S AS T VG+IG G MG M +L+ GY + +++ + D G + SP +A ++D + +++ P+ + + + ++G L ++ G +++D +T +DAPVSGG A++G L GG E L MG V Y G G GQ AK+ ++ +A +M+G Sbjct: 29 AAVCSRSVAS--KTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITML--PTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIG 222
BLAST of FC921294 vs. ExPASy Swiss-Prot
Match: 3HIDH_HUMAN (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 56/198 (28.28%), Postives = 93/198 (46.97%), Query Frame = 2 Query: 110 ATVASTDPASPTNTRVGWIGTGIMGRSMCAHLLNAGYTVTVFNRTLSKAQPLLDIGAHLADSPHSLASQSDVVFSIVGYPSDVRHVLLHP-SSGALSGLRPGGIIVDMTTXXXXXXXXXXXXXXXKNCSAIDAPVSGGDRGAKTGTLAIFAGGDESVVQKLNPLFALMG-KVNYMGGSGKGQFAKLAKSITIATTMVG 697 A V S AS T VG+IG G MG M +L+ GY + +++ + D G + SP +A ++D + +++ P+ + + + ++G L ++ G +++D +T +DAPVSGG A++G L GG E L MG V Y G G GQ AK+ ++ +A +M+G Sbjct: 29 AAVCSRSVAS--KTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITML--PTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIG 222 The following BLAST results are available for this feature:
BLAST of FC921294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921294 ID=FC921294; Name=FC921294; organism=Citrus clementina; type=EST; length=698bpback to top |