FC921307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPFC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_008750 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 63/227 (27.75%), Postives = 105/227 (46.26%), Query Frame = 3 Query: 60 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLP 698 V++ P + SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + I T+AY F+ VP EI E E+ G+E + KD + T T ++ L+ + E+ G Y++ VIDE+ P Sbjct: 30 VVIQPQAIFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEPGK-DIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLE-AIASAKDA-----ESRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAP 245
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: CSN6_DROME (COP9 signalosome complex subunit 6 OS=Drosophila melanogaster GN=CSN6 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 50/224 (22.32%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 60 VIVHPLVLLSIVDNYNRVAKD--TRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG-IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEIL 716 + +HPLV+++I +++ R ++V G L+G +++ NS+ + + + I + +Y+ +K++ + +GWY+TG +D+ I + P+++ ++ + + +P K + E + + ++ +FV + +A E E IGV+H+ R + + S +A + + +A+K L+ R++ + Y+ V KL N EIL Sbjct: 54 ISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVI---NKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAAINECPIMLQLNPLSRSVDHLPLKLF---ESLIDLVDGEATMLFVPLTYTLATEEAERIGVDHVARMTSNESGEKSVVAEHLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQEIL 271
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPCL (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus clavatus GN=ACLA_026150 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 59/226 (26.11%), Postives = 101/226 (44.69%), Query Frame = 3 Query: 60 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLP 698 V++ P + SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P + + I T+AY F+ VP EI E E+ G+E + ++ N T T ++ L+ + ++ G Y++ VIDE+ P Sbjct: 30 VVIQPQAIFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLEAI------SSARDAENRATNIFTDIEALERAIEDVLGMIDRVSRYVESVIDEEAP 245
BLAST of FC921307 vs. ExPASy Swiss-Prot
Match: EI3F2_DROPS (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 53/218 (24.31%), Postives = 102/218 (46.79%), Query Frame = 3 Query: 57 KVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLG--SSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPN--PVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEK 692 KV++HPLVL I+D Y R AKD V+G LLG + G ++++N ++V + LD Y M + + +E V+GW+STG + +++H+ + N P+ +++D + + T+ + V T+ +F +P +I + + + H+ R T L E+ + A K + +L + Y++ +++ K Sbjct: 11 KVLLHPLVLFQIIDAYERRAKDV-PEVLGTLLGTVAGKTGRIEITNCFSVVHRMHGDNNCHIDLDLKYDNDMLELAQIAYPQEKVLGWFSTGKSVSAAAVELHEYYERQCHNGQPLHLLMDTSLRGQRMNTRIFCAVATGVPGGTK--GLMFSLLPMDIYFGSPDIVAMRHMGRQCAQPTKDAGRLLPELEQVVDATKDIQQKLDLVLRYINDILNRK 225 The following BLAST results are available for this feature:
BLAST of FC921307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921307 ID=FC921307; Name=FC921307; organism=Citrus clementina; type=EST; length=723bpback to top |